Structure and origin of a novel dimeric retroposon B1-dID

被引:24
作者
Kramerov, DA [1 ]
Vassetzky, NS [1 ]
机构
[1] Russian Acad Sci, VA Engelhardt Mol Biol Inst, Lab Eukaryot Genome Evolut, Moscow 117984, Russia
关键词
repetitive DNA; SINEs; retroposons; B1; ID; Alu; rodents; Gliridae; Sciuridae; Castoridae;
D O I
10.1007/s002390010142
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Here we describe a new short retroposon family of rodents. Like the primate Alu element consisting of two similar monomers, it is dimeric, but the left and right monomers are different and descend from B1 and ID short retroposons, respectively. Such elements (B1-dID) were found in the genomes of Gliridae, Sciuridae, Castoridae, Caviidae, and Hystricidae. Nucleotide sequences of this retroposon can be assigned to several structural variants. Phylogenetic analysis of B1-dID and related sequences suggests a possible scenario of B1-dID evolution in the context of rodent evolution.
引用
收藏
页码:137 / 143
页数:7
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