Statistical methods for comparing comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry results:: Metabolomic analysis of mouse tissue extracts

被引:109
作者
Shellie, RA
Welthagen, W
Zrostliková, J
Spranger, J
Ristow, M
Fiehn, O
Zimmermann, R [1 ]
机构
[1] GSF Res Ctr, Inst Ecol Chem, Oberschleissheim, Germany
[2] Max Planck Inst Mol Plant Physiol, Golm, Germany
[3] Univ Augsburg, D-8900 Augsburg, Germany
[4] Leco Instruments, Prague, Czech Republic
[5] German Inst Human Nutr, Rehbrucke, Germany
[6] Charite, Berlin, Germany
[7] Univ Calif Davis, UC Davis Genome Ctr, Davis, CA 95616 USA
[8] BIfA, Bavarian Inst Appl Environm Res & Technol, Augsburg, Germany
关键词
gas chromatography; comprehensive two-dimensional; mass spectrometry; time-of-flight; metabolomics; data processing;
D O I
10.1016/j.chroma.2005.05.088
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The potential for the utilization of GC x GC-time-of-flight (TOF) MS for high-resolution metabolomics studies is discussed, with the implementation of some statistical comparisons for biomarker detection. Metabolite profiles from NZO obese mice versus BL/6 control mice are compared and contrasted using a number of chromatogram comparison routines, including direct chromatogram comparisons, chromatogram subtraction and averaging routines, as well as a method for generating relative weighted peak surface difference chromatograms, and a more conventional Student's t-test statistical approach. (c) 2005 Elsevier B.V. All rights reserved.
引用
收藏
页码:83 / 90
页数:8
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