The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

被引:1517
作者
Hardoim, Pablo R. [1 ]
van Overbeek, Leonard S. [2 ]
Berg, Gabriele [3 ]
Pirttila, Anna Maria [4 ]
Compant, Stephane [5 ]
Campisano, Andrea [6 ]
Doering, Matthias [7 ]
Sessitsch, Angela [5 ]
机构
[1] Univ Algarve, Ctr Marine Sci, Faro, Portugal
[2] Plant Res Int, Wageningen, Netherlands
[3] Graz Univ Technol, Inst Environm Biotechnol, A-8010 Graz, Austria
[4] Univ Oulu, Dept Biol, Oulu, Finland
[5] Austrian Inst Technol GmbH, Dept Hlth & Environm, Bioresources Unit, Tulln, Austria
[6] Fdn Edmund Mach, Res & Innovat Ctr, Sustainable Agroecosyst & Bioresources Dept, San Michele Aliadige, TN, Italy
[7] Inst Pflanzenkultur, Schnega, Germany
基金
奥地利科学基金会;
关键词
ARBUSCULAR MYCORRHIZAL FUNGI; GROWTH-PROMOTING RHIZOBACTERIUM; BACTERIAL COMMUNITY COMPOSITION; BURKHOLDERIA-PHYTOFIRMANS PSJN; SEQUENCE-BASED IDENTIFICATION; SOLANUM-TUBEROSUM L; FRAGARIA-X-ANANASSA; VITIS-VINIFERA L; METHYLOBACTERIUM-EXTORQUENS; PSEUDOMONAS-SYRINGAE;
D O I
10.1128/MMBR.00050-14
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
All plants are inhabited internally by diverse microbial communities comprising bacterial, archaeal, fungal, and protistic taxa. These microorganisms showing endophytic lifestyles play crucial roles in plant development, growth, fitness, and diversification. The increasing awareness of and information on endophytes provide insight into the complexity of the plant microbiome. The nature of plant-endophyte interactions ranges from mutualism to pathogenicity. This depends on a set of abiotic and biotic factors, including the genotypes of plants and microbes, environmental conditions, and the dynamic network of interactions within the plant biome. In this review, we address the concept of endophytism, considering the latest insights into evolution, plant ecosystem functioning, and multipartite interactions.
引用
收藏
页码:293 / 320
页数:28
相关论文
共 368 条
[1]   Bacterial elicitation and evasion of plant innate immunity [J].
Abramovitch, Robert B. ;
Anderson, Jeffrey C. ;
Martin, Gregory B. .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2006, 7 (08) :601-611
[2]  
Ahlholm JU, 2002, EVOLUTION, V56, P1566, DOI 10.1111/j.0014-3820.2002.tb01468.x
[3]   Stenotrophomonas comparative genomics reveals genes and functions that differentiate beneficial and pathogenic bacteria [J].
Alavi, Peyman ;
Starcher, Margaret R. ;
Thallinger, Gerhard G. ;
Zachow, Christin ;
Mueller, Henry ;
Berg, Gabriele .
BMC GENOMICS, 2014, 15
[4]   Delay of flower senescence by bacterial endophytes expressing 1-aminocyclopropane-1-carboxylate deaminase [J].
Ali, S. ;
Charles, T. C. ;
Glick, B. R. .
JOURNAL OF APPLIED MICROBIOLOGY, 2012, 113 (05) :1139-1144
[5]   Fungal endophytes from higher plants: a prolific source of phytochemicals and other bioactive natural products [J].
Aly, Amal H. ;
Debbab, Abdessamad ;
Kjer, Julia ;
Proksch, Peter .
FUNGAL DIVERSITY, 2010, 41 (01) :1-16
[6]   Fungal endophytes: unique plant inhabitants with great promises [J].
Aly, Amal Hassan ;
Debbab, Abdessamad ;
Proksch, Peter .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2011, 90 (06) :1829-1845
[7]   Genome sequence of the β-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia [J].
Amadou, Claire ;
Pascal, Geraldine ;
Mangenot, Sophie ;
Glew, Michelle ;
Bontemps, Cyril ;
Capela, Delphine ;
Carrere, Sebastien ;
Cruveiller, Stephane ;
Dossat, Carole ;
Lajus, Aurelie ;
Marchetti, Marta ;
Poinsot, Verene ;
Rouy, Zoe ;
Servin, Bertrand ;
Saad, Maged ;
Schenowitz, Chantal ;
Barbe, Valerie ;
Batut, Jacques ;
Medigue, Claudine ;
Masson-Boivin, Catherine .
GENOME RESEARCH, 2008, 18 (09) :1472-1483
[8]   Endophytic Colonization of Potato (Solanum tuberosum L.) by a Novel Competent Bacterial Endophyte, Pseudomonas putida Strain P9, and Its Effect on Associated Bacterial Communities [J].
Andreote, Fernando Dini ;
de Araujo, Welington L. ;
de Azevedo, Joao L. ;
van Elsas, Jan Dirk ;
da Rocha, Ulisses Nunes ;
van Overbeek, Leonard S. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2009, 75 (11) :3396-3406
[9]  
[Anonymous], THE EXTENDED PHENOTY
[10]  
[Anonymous], 1995, NATO ASI SERIES G, DOI [DOI 10.1007/978-3-642-79906-8_18, DOI 10.1007/978-3-642-79906-8_]