Knowledge-Based Optimization of Molecular Geometries Using Crystal Structures

被引:10
作者
Cole, Jason C. [1 ]
Groom, Colin R. [1 ]
Korb, Oliver [1 ]
McCabe, Patrick [1 ]
Shields, Gregory P. [1 ]
机构
[1] Cambridge Crystallog Data Ctr, 12 Union Rd, Cambridge CB2 1EZ, England
关键词
FORCE; VALIDATION; VAN;
D O I
10.1021/acs.jcim.5b00712
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
This paper describes a novel way to use the structural information contained in the Cambridge Structural Database (CSD) to drive geometry optimization of organic molecules. We describe how CSD structural information is transformed into objective functions for gradient based optimization to provide good quality geometries for a large variety of organic molecules. Performance is assessed by minimizing different sets of organic molecules reporting RMSD movements for bond lengths, valence angles, torsion angles, and heavy atom positions.
引用
收藏
页码:652 / 661
页数:10
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