A density functional approach of prototropic tautomerism of guanine

被引:28
作者
Tian, SX [1 ]
Xu, KZ [1 ]
机构
[1] Univ Sci & Technol China, Dept Modern Phys, Anhui 230027, Peoples R China
基金
中国国家自然科学基金;
关键词
nucleic acid base; guanine; prototropic tautomerism; transition states; density functional method; ab initio;
D O I
10.1016/S0301-0104(00)00359-1
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Seven tautomeric species of guanine are studied through density functional calculations with various exchange-correlation functionals X alpha PL, X alpha LYP, and B3LYP, as well as the Hartree-Fock ab initio, using the 6-31G(d), 6-31+G(d,p) and D95V(d) basis sets. Corrections for the zero-point vibrational energy are included. Based on the self-consistent reaction field calculations with the Onsager or polarized continuum model approximation, it is found that guanine N(7)H[G5] is more stable than N(9)H[G1] tautomer in vacuum with 55 kcal mol(-1) high energy barrier, which is inverse in water solution. We also investigate the thermodynamic effect on the distribution of the prototropic tautomers using transition state theory. (C) 2001 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:187 / 196
页数:10
相关论文
共 49 条
[1]  
ATKINS PW, 1982, PHYSICAL CHEM
[2]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[3]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[4]  
Bottcher C J F, 1973, THEORY ELECT POLARIZ
[5]   Ab initio MP2 and DFT calculations of geometry and solution tautomerism of purine and some purine derivatives [J].
Broo, A ;
Holmen, A .
CHEMICAL PHYSICS, 1996, 211 (1-3) :147-161
[6]  
DEVILN FJ, 1995, J PHYS CHEM, V98, P16883
[7]  
Dunning Jr T. H., 1976, MODERN THEORETICAL C, V3, P1, DOI DOI 10.1007/978-1-4757-0887-5_1
[8]  
FRISCH AE, 1998, GAUSSIAN 98 USERS RE
[9]  
Frisch M.J., 2016, Gaussian 16 Revision C. 01. 2016, V16, P01
[10]   STUDIES OF THE TAUTOMERISM OF PURINE AND THE PROTONATION OF PURINE AND ITS 7-METHYL AND 9-METHYL DERIVATIVES BY N-15 NUCLEAR MAGNETIC-RESONANCE SPECTROSCOPY [J].
GONNELLA, NC ;
ROBERTS, JD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1982, 104 (11) :3162-3164