MARAN: normalizing micro-array data

被引:13
作者
Engelen, K [1 ]
Coessens, B [1 ]
Marchal, K [1 ]
De Moor, B [1 ]
机构
[1] Katholieke Univ Leuven, ESAT SCD, B-3001 Louvain, Belgium
关键词
D O I
10.1093/bioinformatics/btg085
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
MARAN is a web-based application for normalizing microarray data. MARAN comprises a generic ANOVA model, an option for Loess fitting prior to ANOVA analysis, and a module for selecting genes with significantly changing expression.
引用
收藏
页码:893 / 894
页数:2
相关论文
共 6 条
  • [1] 1977 RIETZ LECTURE - BOOTSTRAP METHODS - ANOTHER LOOK AT THE JACKKNIFE
    EFRON, B
    [J]. ANNALS OF STATISTICS, 1979, 7 (01) : 1 - 26
  • [2] The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster
    Jin, W
    Riley, RM
    Wolfinger, RD
    White, KP
    Passador-Gurgel, G
    Gibson, G
    [J]. NATURE GENETICS, 2001, 29 (04) : 389 - 395
  • [3] Analysis of variance for gene expression microarray data
    Kerr, MK
    Martin, M
    Churchill, GA
    [J]. JOURNAL OF COMPUTATIONAL BIOLOGY, 2000, 7 (06) : 819 - 837
  • [4] MARCHAL K, 2002, IN PRESS J BIOL SYST
  • [5] INCLUSive: INtegrated clustering, upstream of sequence retrieval and motif sampling
    Thijs, G
    Moreau, Y
    De Smet, F
    Mathys, J
    Lescot, M
    Rombauts, S
    Rouze, P
    De Moor, B
    Marchal, K
    [J]. BIOINFORMATICS, 2002, 18 (02) : 331 - 332
  • [6] Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation
    Yang, YH
    Dudoit, S
    Luu, P
    Lin, DM
    Peng, V
    Ngai, J
    Speed, TP
    [J]. NUCLEIC ACIDS RESEARCH, 2002, 30 (04) : e15