In this study we tested whether HIV-1 replication could be inhibited by stable RNAi-mediated knockdown of cellular co-factors. Cell lines capable of expressing shRNAs against 30 candidate co-factors implicated at different steps of the viral replication cycle were generated and analyzed for effects on cell viability and inhibition of HIV-1 replication. For half of these candidate co-factors we obtained knockdown cell lines that are less susceptible to virus replication. For three co-factors (ALIX, ATG16 and TRBP) the cell lines were resistant to HIV-1 replication for up to 2 months. With these cells we could test the hypothesis that HIV-1 is not able to escape from RNAi-mediated suppression of cellular co-factors, which was indeed not detected. (C) 2010 Elsevier B.V. All rights reserved.
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Univ Washington, Dept Microbiol, Seattle, WA 98195 USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Chan, Eric Y.
;
Sutton, Jennifer N.
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Thermo Fisher Sci, Cambridge, MA USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Sutton, Jennifer N.
;
Jacobs, Jon M.
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Pacific NW Natl Lab, Environm Mol Sci Lab, Richland, WA 99352 USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Jacobs, Jon M.
;
Bondarenko, Andrey
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Rosetta Biosoftware, Seattle, WA USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Bondarenko, Andrey
;
Smith, Richard D.
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Pacific NW Natl Lab, Environm Mol Sci Lab, Richland, WA 99352 USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Smith, Richard D.
;
Katze, Michael G.
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Univ Washington, Dept Microbiol, Seattle, WA 98195 USA
Univ Washington, Washington Natl Primate Res Ctr, Seattle, WA 98195 USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
机构:
Univ Washington, Dept Microbiol, Seattle, WA 98195 USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Chan, Eric Y.
;
Sutton, Jennifer N.
论文数: 0引用数: 0
h-index: 0
机构:
Thermo Fisher Sci, Cambridge, MA USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Sutton, Jennifer N.
;
Jacobs, Jon M.
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h-index: 0
机构:
Pacific NW Natl Lab, Environm Mol Sci Lab, Richland, WA 99352 USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Jacobs, Jon M.
;
Bondarenko, Andrey
论文数: 0引用数: 0
h-index: 0
机构:
Rosetta Biosoftware, Seattle, WA USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Bondarenko, Andrey
;
Smith, Richard D.
论文数: 0引用数: 0
h-index: 0
机构:
Pacific NW Natl Lab, Environm Mol Sci Lab, Richland, WA 99352 USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA
Smith, Richard D.
;
Katze, Michael G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Microbiol, Seattle, WA 98195 USA
Univ Washington, Washington Natl Primate Res Ctr, Seattle, WA 98195 USAUniv Washington, Dept Microbiol, Seattle, WA 98195 USA