MREPATT: detection and analysis of exact consecutive repeats in genomic sequences

被引：10

作者：

Roset, R

Subirana, JA

Messeguer, X

机构：

[1] Univ Politecn Cataluna, Dept Engn Quim, E-08028 Barcelona, Spain

[2] Univ Politecn Cataluna, IBM Res Inst, Cepba, ES-08034 Barcelona, Spain

[3] Univ Politecn Cataluna, Software Dept, Algorithm & Genet Grp, ES-08034 Barcelona, Spain

来源：

BIOINFORMATICS | 2003年 / 19卷 / 18期

关键词：

D O I：

10.1093/bioinformatics/btg326

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

We have developed a program to determine the number, length and position of exact consecutive repeats of short sequences in DNA fragments or whole genomes. The program also gives the statistical significance of results by comparing them with those expected for a random sequence generated according to a Markovian model.

引用

页码：2475 / 2476

页数：2

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