Computational calculations of pKa values of imidazole in Cu(II) complexes of biological relevance

被引:61
作者
Ali-Torres, Jorge [1 ]
Rodriguez-Santiago, Luis [1 ]
Sodupe, Mariona [1 ]
机构
[1] Univ Autonoma Barcelona, Dept Quim, Bellaterra 08193, Spain
关键词
CYTOCHROME-C-OXIDASE; DENSITY-FUNCTIONAL THEORY; PROTON-PUMPING MECHANISM; TRANSITION-METAL; ORGANIC-ACIDS; FREE-ENERGIES; AMINO-ACIDS; HISTIDINE; DERIVATIVES; COPPER(II);
D O I
10.1039/c0cp02319a
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The imidazole ring is part of the lateral chain of histidine. One of the main features of this amino acid is the ability to coordinate copper, especially Cu2+, because of the intermediate base nature of its imidazole ring, which has a great biological relevance. Proteins such as cytochrome c oxidase, a crucial enzyme in the respiratory chain, and beta-amyloid peptide, implicated in the pathology of Alzheimer's disease, are examples of proteins containing histidines in their coordination sphere. Several studies indicate that the presence of this metal ion produces a decrease in the pK(a) of the imidazole ring of histidine. However, there are no reports of systematic studies of pK(a) variation in these types of metal cation complexes. In this work we use density functional theory to study the dependence of imidazole pK(a) with the number of imidazole rings in Cu2+ coordination environments. The pK(a) of isolated imidazole (ImH), and the pK(a) of imidazole in Cu2+(ImH)(m)(H2O)(4-m) (m = 1-3) complexes have been studied using two different functionals, B3LYP and MPWB1K, which have different percentage of exact exchange, and the highly-correlated CCSD(T) method. Results show that imidazole pK(a) decreases between 2 and 7 units depending on the method employed and the number of imidazole rings coordinating the metal cation. Taking into account that the pK(a) of imidazole is 14, this decrease could be relevant in biological processes.
引用
收藏
页码:7852 / 7861
页数:10
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