Rapid detection of Betacoronavirus 1 from clinical fecal specimens by a novel reverse transcription loop-mediated isothermal amplification assay

被引:6
作者
Qiao, Jun [1 ]
Meng, Qingling [1 ]
Cai, Xuepeng [2 ]
Chen, Chuangfu [1 ]
Zhang, Zaichao [1 ]
Tian, Zhenzhong [1 ]
机构
[1] Shihezi Univ, Coll Anim Sci & Technol, Shihezi City 832003, Xinjiang, Peoples R China
[2] Chinese Acad Agr Sci, Lanzhou Vet Res Inst, State Key Lab Vet Etiol Biol, Lanzhou, Gansu, Peoples R China
关键词
Betacoronavirus; 1; nucleocapsid gene; rapid detection; reverse transcription loop-mediated isothermal amplification; NEONATAL CALF DIARRHEA; BOVINE CORONAVIRUS; PCR ASSAY; CATTLE; FECES; GENE; DNA;
D O I
10.1177/1040638711425937
中图分类号
S85 [动物医学(兽医学)];
学科分类号
0906 ;
摘要
Betacoronavirus 1 (BCoV-1) is an important pathogen causing diarrhea in calves. In the current study, a novel reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay for rapid detection of BCoV-1 was successfully developed. The primers were designed to target the highly conserved fragment of BCoV-1 nucleocapsid gene. The assay displayed high specificity detecting only BCoV-1 with no cross reaction with other viruses. When 418 clinical samples from 6 different geographical areas of Xinjiang province were tested by the RT-LAMP method, the results indicated that this test is a simple, rapid, accurate, and sensitive method for the detection of BCoV-1.
引用
收藏
页码:174 / 177
页数:4
相关论文
共 15 条
[1]   Bovine Coronavirus Associated Syndromes [J].
Boileau, Melanie J. ;
Kapil, Sanjay .
VETERINARY CLINICS OF NORTH AMERICA-FOOD ANIMAL PRACTICE, 2010, 26 (01) :123-+
[2]   ISOLATION OF CORONAVIRUSES FROM NEONATAL CALF DIARRHEA IN GREAT-BRITAIN AND DENMARK [J].
BRIDGER, JC ;
WOODE, GN ;
MEYLING, A .
VETERINARY MICROBIOLOGY, 1978, 3 (02) :101-113
[3]   Evaluation of concurrent shedding of bovine coronavirus via the respiratory tract and enteric route in feedlot cattle [J].
Cho, KO ;
Hoet, AE ;
Loerch, SC ;
Wittum, TE ;
Saif, LJ .
AMERICAN JOURNAL OF VETERINARY RESEARCH, 2001, 62 (09) :1436-1441
[4]   Development of a panel of multiplex real-time polymerase chain reaction assays for simultaneous detection of major agents causing calf diarrhea in feces [J].
Cho, Yong-Il ;
Kim, Won-Il ;
Liu, Siyuan ;
Kinyon, Joann M. ;
Yoon, Kyoungjin J. .
JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION, 2010, 22 (04) :509-517
[5]   Detection of bovine coronavirus using a TaqMan-based real-time RT-PCR assay [J].
Decaro, Nicola ;
Elia, Gabriella ;
Campolo, Marco ;
Desario, Costantina ;
Mari, Viviana ;
Radogna, Arianna ;
Colaianni, Maria Loredana ;
Cirone, Francesco ;
Tempesta, Maria ;
Buonavoglia, Canio .
JOURNAL OF VIROLOGICAL METHODS, 2008, 151 (02) :167-171
[6]  
DURHAM PJK, 1989, CAN VET J, V30, P825
[7]   Efficacy of loop mediated isothermal amplification (LAMP) assay for the laboratory identification of Mycobacterium tuberculosis isolates in a resource limited setting [J].
Geojith, G. ;
Dhanasekaran, S. ;
Chandran, Salesh P. ;
Kenneth, John .
JOURNAL OF MICROBIOLOGICAL METHODS, 2011, 84 (01) :71-73
[8]   Detection of respiratory and enteric shedding of bovine coronaviruses in cattle in northwestern Turkey [J].
Hasoksuz, M ;
Kayar, A ;
Dodurka, T ;
Ilgaz, A .
ACTA VETERINARIA HUNGARICA, 2005, 53 (01) :137-146
[9]   Molecular analysis of the S glycoprotein gene of bovine coronaviruses isolated in Japan from 1999 to 2006 [J].
Kanno, Toru ;
Hatama, Shinichi ;
Ishihara, Ryoko ;
Uchida, Ikuo .
JOURNAL OF GENERAL VIROLOGY, 2007, 88 :1218-1224
[10]  
MEBUS CA, 1973, AM J VET RES, V34, P145