The Crystal Structures of Eukaryotic Phosphofructokinases from Baker's Yeast and Rabbit Skeletal Muscle

被引:50
作者
Banaszak, Katarzyna [1 ]
Mechin, Ingrid [2 ]
Obmolova, Galina [2 ]
Oldham, Michael [3 ]
Chang, Simon H. [3 ]
Ruiz, Teresa [4 ]
Radermacher, Michael [4 ]
Kopperschlaeger, Gerhard [5 ]
Rypniewski, Wojciech [1 ]
机构
[1] Polish Acad Sci, Inst Bioorgan Chem, PL-61704 Poznan, Poland
[2] Hamburg Outstn, European Mol Biol Lab, D-22607 Hamburg, Germany
[3] Louisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USA
[4] Univ Vermont, Dept Mol Physiol & Biophys, Burlington, VT 05405 USA
[5] Univ Leipzig, Fak Med, Inst Biochem, D-04103 Leipzig, Germany
基金
美国国家卫生研究院;
关键词
glycolysis; protein structure; fructose 2,6-bisphosphate; metabolism; crystallography; SACCHAROMYCES-CEREVISIAE; ALLOSTERIC BEHAVIOR; CRYSTALLIZATION; EVOLUTION; SITES; DUPLICATION; MICROSCOPY; GENE; FORM;
D O I
10.1016/j.jmb.2011.01.019
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Phosphofructokinase 1 (PFK) is a multisubunit allosteric enzyme that catalyzes the principal regulatory step in glycolysis the phosphorylation of fructose 6-phosphate to fructose 1,6-bisphosphate by ATP. The activity of eukaryotic PFK is modulated by a number of effectors in response to the cell's needs for energy and building blocks for biosynthesis. The crystal structures of eukaryotic PFKs from Saccharomyces cerevisiae and rabbit skeletal muscle demonstrate how successive gene duplications and fusion are reflected in the protein structure and how they allowed the evolution of new functionalities. The basic framework inherited from prokaryotes is conserved, and additional levels of structural and functional complexity have evolved around it. Analysis of protein ligand complexes has shown how PFK is activated by fructose 2,6-bisphosphate (a powerful PFK effector found only in eukaryotes) and reveals a novel nucleotide binding site. Crystallographic results have been used as the basis for structure-based effector design. (C) 2011 Elsevier Ltd. All rights reserved.
引用
收藏
页码:284 / 297
页数:14
相关论文
共 50 条
[1]
THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]
PHOSPHOFRUCTOKINASE FROM BAKERS-YEAST - PROPERTIES OF A PROTEOLYTICALLY MODIFIED ACTIVE ENZYME FORM [J].
BAR, J ;
HUSE, K ;
KOPPERSCHLAGER, G ;
BEHLKE, J ;
SCHULZ, W .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 1988, 10 (02) :99-105
[3]
The structure of the ATP-bound state of S-cerevisiae phosphofructokinase determined by cryo-electron microscopy [J].
Barcena, Montserrat ;
Radermacher, Michael ;
Baer, Jorg ;
Kopperschlaeger, Gerhard ;
Ruiz, Teresa .
JOURNAL OF STRUCTURAL BIOLOGY, 2007, 159 (01) :135-143
[4]
BOCK PE, 1976, J BIOL CHEM, V251, P5630
[5]
Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[6]
STUDIES ON THE STRUCTURE OF YEAST PHOSPHOFRUCTOKINASE [J].
CHAFFOTTE, AF ;
LAURENT, M ;
TIJANE, M ;
TARDIEU, A ;
ROUCOUS, C ;
SEYDOUX, F ;
YON, JM .
BIOCHIMIE, 1984, 66 (01) :49-58
[7]
Role of Ser530, Arg292, and His662 in the allosteric behavior of rabbit muscle phosphofructokinase [J].
Chang, SH ;
Kemp, RG .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2002, 290 (02) :670-675
[8]
Cowtan K., 1994, JOINT CCP4 ESF EACBM, V31, P34
[9]
DUNAWAY GA, 1983, MOL CELL BIOCHEM, V52, P75
[10]
Scaling and assessment of data quality [J].
Evans, P .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2006, 62 :72-82