Role of the electrostatic loop charged residues in Cu,Zn superoxide dismutase

被引:27
作者
Polticelli, F
Battistoni, A
O'Neill, P
Rotilio, G
Desideri, A
机构
[1] Univ Roma Tor Vergata, Dept Biol, INFM, I-00133 Rome, Italy
[2] Univ Rome 3, Dept Biol, I-00146 Rome, Italy
[3] MRC, Radiobiol Unit, Didcot OX11 0RD, Oxon, England
关键词
Brownian dynamics; Poisson-Boltzmann; pulse radiolysis; site-directed mutagenesis; superoxide dismutase;
D O I
10.1002/pro.5560071112
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have expressed and characterized a mutant of Xenopus laevis Cu,Zn superoxide dismutase in which four highly conserved charged residues belonging to the electrostatic loop have been replaced by neutral side chains: Lps120 --> Leu, Asp130 --> Gin, Glu131 --> Gin, and Lys134 --> Thr. At low ionic strength, the mutant enzyme is one of the fastest superoxide dismutases ever assayed (k = 6.7 x 10(9) M-1 s(-1), at pH 7 and mu = 0.02 M). Brownian dynamics simulations give rise to identical enzyme-substrate association rates for both wild-type and mutant enzymes, ruling out the possibility that enhancement of the activity is due to pure electrostatic factors. Comparative analysis of the experimental catalytic rate of the quadruple and single mutants reveals the nonadditivity of the mutation effects, indicating that the hyperefficiency of the mutant is due to a decrease of the energy barrier and/or to an alternative pathway for the diffusion of superoxide within the active site channel. At physiological ionic strength the catalytic rate of the mutant at neutral pH is similar to that of the wild-type enzyme as it is to the catalytic rate pH dependence. Moreover, mutation effects are additive. These results show that, at physiological salt conditions, electrostatic loop charged residues do not influence the diffusion pathway of the substrate and, if concomitantly neutralized, are not essential for high catalytic efficiency of the enzyme, pointing out the role of the metal cluster and of the invariant Arg141 in determining the local electrostatic forces facilitating the diffusion of the substrate towards the active site.
引用
收藏
页码:2354 / 2358
页数:5
相关论文
共 36 条
[1]   ASPECTS OF THE STRUCTURE, FUNCTION, AND APPLICATIONS OF SUPEROXIDE-DISMUTASE [J].
BANNISTER, JV ;
BANNISTER, WH ;
ROTILIO, G .
CRC CRITICAL REVIEWS IN BIOCHEMISTRY, 1987, 22 (02) :111-180
[2]   ISOLATION OF AN ACTIVE AND HEAT-STABLE MONOMERIC FORM OF CU,ZN SUPEROXIDE-DISMUTASE FROM THE PERIPLASMIC SPACE OF ESCHERICHIA-COLI [J].
BATTISTONI, A ;
ROTILIO, G .
FEBS LETTERS, 1995, 374 (02) :199-202
[3]  
BATTISTONI A, 1992, BIOCHEM BIOPH RES CO, V186, P1339
[4]   CONSERVED PATTERNS IN THE CU,ZN SUPEROXIDE-DISMUTASE FAMILY [J].
BORDO, D ;
DJINOVIC, K ;
BOLOGNESI, M .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 238 (03) :366-386
[5]   Novel dimeric interface and electrostatic recognition in bacterial Cu,Zn superoxide dismutase [J].
Bourne, Y ;
Redford, SM ;
Steinman, HM ;
Lepock, JR ;
Tainer, JA ;
Getzoff, ED .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (23) :12774-12779
[6]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[7]   CARBAMOYLATION OF CU,ZN-SUPEROXIDE DISMUTASE BY CYANATE - ROLE OF LYSINES IN THE ENZYME ACTION [J].
COCCO, D ;
ROSSI, L ;
BARRA, D ;
BOSSA, F ;
ROTILIO, G .
FEBS LETTERS, 1982, 150 (02) :303-306
[8]  
CUDD A, 1982, J BIOL CHEM, V257, P1443
[9]   EVOLUTIONARY CONSERVATIVENESS OF ELECTRIC-FIELD IN THE CU,ZN SUPEROXIDE-DISMUTASE ACTIVE-SITE - EVIDENCE FOR COORDINATED MUTATION OF CHARGED AMINO-ACID-RESIDUES [J].
DESIDERI, A ;
FALCONI, M ;
POLTICELLI, F ;
BOLOGNESI, M ;
DJINOVIC, K ;
ROTILIO, G .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 223 (01) :337-342
[10]  
Djinovic Carugo K, 1996, Acta Crystallogr D Biol Crystallogr, V52, P176, DOI 10.1107/S0907444995007608