Molecular structure and dynamics of proteins in solution: Insights derived from high-resolution NMR approaches

被引:8
作者
Torchia, DA [1 ]
Ishima, R [1 ]
机构
[1] Natl Inst Dent & Craniofacial Res, Struct Mol Biol Unit, NIH, Bethesda, MD 20892 USA
关键词
D O I
10.1351/pac200375101371
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
This article reviews heteronuclear NMR techniques that are used to characterize the 3D structures and internal molecular dynamics of proteins in solution. Applications to several proteins that have been studied in our laboratory are presented. Topics discussed include sequential assignments, the use of nuclear Overhauser enhancement spectroscopy (NOESY) and residual dipolar coupling restraints to determine protein structure, and the use of relaxation measurements to obtain information about protein internal motions. Also discussed are recent computational approaches directed at increasing the efficiency of structure determination, as well as new methods for studying large proteins.
引用
收藏
页码:1371 / 1381
页数:11
相关论文
共 53 条
[1]   Molecular recognition of cyclic urea HIV-1 protease inhibitors [J].
Ala, PJ ;
DeLoskey, RJ ;
Huston, EE ;
Jadhav, PK ;
Lam, PYS ;
Eyermann, CJ ;
Hodge, CN ;
Schadt, MC ;
Lewandowski, FA ;
Weber, PC ;
McCabe, DD ;
Duke, JL ;
Chang, CH .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (20) :12325-12331
[2]  
[Anonymous], 2018, Protein nmr spectroscopy: principles and practice
[3]  
[Anonymous], 1986, NMR of Proteins and Nucleic Acids
[4]   SECONDARY STRUCTURE AND TOPOLOGY OF ACANTHAMOEBA PROFILIN-I AS DETERMINED BY HETERONUCLEAR NUCLEAR-MAGNETIC-RESONANCE SPECTROSCOPY [J].
ARCHER, SJ ;
VINSON, VK ;
POLLARD, TD ;
TORCHIA, DA .
BIOCHEMISTRY, 1993, 32 (26) :6680-6687
[5]   Structure of outer membrane protein A transmembrane domain by NMR spectroscopy [J].
Arora, A ;
Abildgaard, F ;
Bushweller, JH ;
Tamm, LK .
NATURE STRUCTURAL BIOLOGY, 2001, 8 (04) :334-338
[6]   Dipolar couplings in macromolecular structure determination [J].
Bax, A ;
Kontaxis, G ;
Tjandra, N .
NUCLEAR MAGNETIC RESONANCE OF BIOLOGICAL MACROMOLECULES, PT B, 2001, 339 :127-174
[7]  
BAX A, 1994, METHOD ENZYMOL, V239, P79
[8]  
BRUNGER AT, 1992, X PLOR MANUAL VERSIO
[9]   Direct observation of hydrogen bonds in proteins by interresidue 3hJNC′ scalar couplings [J].
Cordier, F ;
Grzesiek, S .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (07) :1601-1602
[10]   Protein backbone angle restraints from searching a database for chemical shift and sequence homology [J].
Cornilescu, G ;
Delaglio, F ;
Bax, A .
JOURNAL OF BIOMOLECULAR NMR, 1999, 13 (03) :289-302