Detection and biovar discrimination of Ureaplasma urealyticum by real-time PCR

被引:80
作者
Yi, JY
Yoon, BH
Kim, EC
机构
[1] Seoul Natl Univ, Coll Med, Dept Lab Med, Seoul 110744, South Korea
[2] Seoul Natl Univ, Coll Med, Dept Obstet & Gynecol, Seoul, South Korea
关键词
Ureaplasma urealyticum; real-time PCR; premature birth; intrauterine infection;
D O I
10.1016/j.mcp.2005.04.002
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Prenatal intrauterine infection has been recognized as an important cause of premature birth, and Ureaplasma urealyticum is one of the commonest pathogens. U. urealyticum consists of 14 serovars that can be divided into two biovars (parvo and T960), and the pathogenicity of U. urealyticuni may be different according to the biovar. To detect U. urealyticum and determine its biovar simultaneously, we developed a real-time polymerase chain reaction (PCR) assay targeting urease gene. The real-time PCR biovar-typed two reference strains and 42 culture isolates of U. urealyticum as correctly as conventional PCR with direct sequencing. Subsequently, 87 clinical specimens (amniotic fluid, cord blood, vaginal swab) were tested for culture, conventional PCR, and real-time PCR. When compared with conventional PCR, sensitivity and specificity of real-time PCR were 89.5 and 98.5%, respectively, and those of culture were 47.4 and 100%, respectively. Of 18 clinical specimens that were found positive and biovar-typed by real-time PCR, parvo biovar was 66.7% and T960 biovar was 33.3%. This real-time PCR assay can be useful for the simultaneous detection and biovar discrimination of U. urealyticum in clinical specimens. Further study to quantify U. urealyticum would be facilitated on the basis of this method. (C) 2005 Elsevier Ltd. All rights reserved.
引用
收藏
页码:255 / 260
页数:6
相关论文
共 31 条
[1]   Association of Ureaplasma urealyticum biovars with clinical outcome for neonates, obstetric patients, and gynecological patients with pelvic inflammatory disease [J].
AbeleHorn, M ;
Wolff, C ;
Dressel, P ;
Pfaff, F ;
Zimmermann, A .
JOURNAL OF CLINICAL MICROBIOLOGY, 1997, 35 (05) :1199-1202
[2]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[3]   UREAPLASMA UREALYTICUM UREASE GENES - USE OF A UGA TRYPTOPHAN CODON [J].
BLANCHARD, A .
MOLECULAR MICROBIOLOGY, 1990, 4 (04) :669-676
[4]   UREAPLASMA-UREALYTICUM INTRAUTERINE INFECTION - ROLE IN PREMATURITY AND DISEASE IN NEWBORNS [J].
CASSELL, GH ;
WAITES, KB ;
WATSON, HL ;
CROUSE, DT ;
HARASAWA, R .
CLINICAL MICROBIOLOGY REVIEWS, 1993, 6 (01) :69-87
[5]   Detection of Ureaplasma urealyticum in second-trimester amniotic fluid by polymerase chain reaction correlates with subsequent preterm labor and delivery [J].
Gerber, S ;
Vial, Y ;
Hohlfeld, P ;
Witkin, SS .
JOURNAL OF INFECTIOUS DISEASES, 2003, 187 (03) :518-521
[6]   Gene quantification using real-time quantitative PCR: An emerging technology hits the mainstream [J].
Ginzinger, DG .
EXPERIMENTAL HEMATOLOGY, 2002, 30 (06) :503-512
[7]   The complete sequence of the mucosal pathogen Ureaplasma urealyticum [J].
Glass, JI ;
Lefkowitz, EJ ;
Glass, JS ;
Heiner, CR ;
Chen, EY ;
Cassell, GH .
NATURE, 2000, 407 (6805) :757-762
[8]  
Grattard F, 1995, MOL CELL PROBE, V9, P383
[9]   A CASE-CONTROL STUDY OF CHORIOAMNIONIC INFECTION AND HISTOLOGIC CHORIOAMNIONITIS IN PREMATURITY [J].
HILLIER, SL ;
MARTIUS, J ;
KROHN, M ;
KIVIAT, N ;
HOLMES, KK ;
ESCHENBACH, DA .
NEW ENGLAND JOURNAL OF MEDICINE, 1988, 319 (15) :972-978
[10]  
HOROWITZ S, 1995, J REPROD MED, V40, P375