Phylogenetic position of phytopathogens within the Enterobacteriaceae

被引:390
作者
Hauben, L [1 ]
Moore, ERB
Vauterin, L
Steenackers, M
Mergaert, J
Verdonck, L
Swings, J
机构
[1] State Univ Ghent, Microbiol Lab, B-9000 Ghent, Belgium
[2] Natl Res Ctr Biotechnol, Div Microbiol, Braunschweig, Germany
[3] Inst Forestry & Game Management, Geraardsbergen, Belgium
关键词
phytopathogenic Enterobacteriaceae; 16S rDNA; nucleotide sequence; phylogeny; Pectobacterium; Brenneria;
D O I
10.1016/S0723-2020(98)80048-9
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The almost complete 16S rDNA sequences of twenty nine plant-associated strains, representing species of the genera Erwinia, Pantoea and Enterobacter were determined and compared with those of other members of the Enterobacterinceae. The species of the genus Erwinia may be divided into three phylogenetic groups. Cluster I represents the true erwinias and comprises E. amylovora, E. mallotivora, E. persicinus, E. psidii, E. rhapontici and E. tracheiphila. We propose to unite the species of cluster II, E. carotovora subsp. atroseptica, E. carotovora subsp. betavasculorum, E. carotovora subsp, carotovora, E. carotovora subsp. odorifera, E. carotovora subsp. wasabiae, E. cacticida, E. chrysanthemi and E. cypripedii in the genus Pectobacterium respectively as P. carotovonum subsp. atrosepticum comb. nov., P. carotovorum subsp. betavasculorum comb. nov., P. carotovorum subsp. carotovorum comb. nov., P. carotovorum subsp. odoriferum comb. nov., P. carotovorum subsp. wasabiae comb. nov., P. cacticidum comb. nov., P. chrysanthemi and P. cypripenii. The species E. alni, E. nigrifluens, E. paradisiaca, E. quercina, E. rubrifaciens and E. salicis, comprising cluster III, are being classified into a new genus Brenneria gen. nov. respectively as B. alni comb. nov., B, nigrifluens comb. nov., B. paradisiaca comb. nov., B. quercina comb, nov., B. rubrifaciens comb, nov. and B. salicis comb. nov. The species of the genus Pantoea, included in this study, form a monophyletic unit (cluster IV), closely related with Erwinia, whereas the three phytopathogenic species of the genus Enterobacter are scattered among the genera Citrobacter and Klebsiella.
引用
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页码:384 / 397
页数:14
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