Multivalent engagement of chromatin modifications by linked binding modules

被引:802
作者
Ruthenburg, Alexander J. [1 ]
Li, Haitao
Patel, Dinshaw J.
Allis, C. David
机构
[1] Rockefeller Univ, Lab Chromatin Biol, New York, NY 10065 USA
[2] Mem Sloan Kettering Canc Ctr, Struct Biol Program, New York, NY 10065 USA
关键词
D O I
10.1038/nrm2298
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Various chemical modifications on histones and regions of associated DNA play crucial roles in genome management by binding specific factors that, in turn, serve to alter the structural properties of chromatin. These so-called effector proteins have typically been studied with the biochemist's paring knife-the capacity to recognize specific chromatin modifications has been mapped to an increasing number of domains that frequently appear in the nuclear subset of the proteome, often present in large, multisubunit complexes that bristle with modification-dependent binding potential. We propose that multivalent interactions on a single histone tail and beyond may have a significant, if not dominant, role in chromatin transactions.
引用
收藏
页码:983 / 994
页数:12
相关论文
共 130 条
[1]  
Allis C. D., 2006, EPIGENETICS
[2]   Isolation of human NURF:: a regulator of Engrailed gene expression [J].
Barak, O ;
Lazzaro, MA ;
Lane, WS ;
Speicher, DW ;
Picketts, DJ ;
Shiekhattar, R .
EMBO JOURNAL, 2003, 22 (22) :6089-6100
[3]   MITOGEN-STIMULATED PHOSPHORYLATION OF HISTONE H3 IS TARGETED TO A SMALL HYPERACETYLATION-SENSITIVE FRACTION [J].
BARRATT, MJ ;
HAZZALIN, CA ;
CANO, E ;
MAHADEVAN, LC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (11) :4781-4785
[4]   High-resolution profiling of histone methylations in the human genome [J].
Barski, Artern ;
Cuddapah, Suresh ;
Cui, Kairong ;
Roh, Tae-Young ;
Schones, Dustin E. ;
Wang, Zhibin ;
Wei, Gang ;
Chepelev, Iouri ;
Zhao, Keji .
CELL, 2007, 129 (04) :823-837
[5]   Epigenetic gene silencing in cancer - a mechanism for early oncogenic pathway addiction? [J].
Baylin, SB ;
Ohm, JE .
NATURE REVIEWS CANCER, 2006, 6 (02) :107-116
[6]   Gene regulation - A finger on the mark [J].
Becker, PB .
NATURE, 2006, 442 (7098) :31-32
[7]   The complex language of chromatin regulation during transcription [J].
Berger, Shelley L. .
NATURE, 2007, 447 (7143) :407-412
[8]   Nucleosome recognition by the Piccolo NuA4 histone acetyltransferase complex [J].
Berndsen, Christopher E. ;
Selleck, William ;
McBryant, Steven J. ;
Hansen, Jeffrey C. ;
Tan, Song ;
Denu, John M. .
BIOCHEMISTRY, 2007, 46 (08) :2091-2099
[9]   A bivalent chromatin structure marks key developmental genes in embryonic stem cells [J].
Bernstein, BE ;
Mikkelsen, TS ;
Xie, XH ;
Kamal, M ;
Huebert, DJ ;
Cuff, J ;
Fry, B ;
Meissner, A ;
Wernig, M ;
Plath, K ;
Jaenisch, R ;
Wagschal, A ;
Feil, R ;
Schreiber, SL ;
Lander, ES .
CELL, 2006, 125 (02) :315-326
[10]   Genomic maps and comparative analysis of histone modifications in human and mouse [J].
Bernstein, BE ;
Kamal, M ;
Lindblad-Toh, K ;
Bekiranov, S ;
Bailey, DK ;
Huebert, DJ ;
McMahon, S ;
Karlsson, EK ;
Kulbokas, EJ ;
Gingeras, TR ;
Schreiber, SL ;
Lander, ES .
CELL, 2005, 120 (02) :169-181