The protist, Monosiga brevicollis, has a tyrosine kinase signaling network more elaborate and diverse than found in any known metazoan

被引:132
作者
Manning, Gerard [1 ]
Young, Susan L. [2 ,3 ]
Miller, W. Todd [4 ]
Zhai, Yufeng [1 ]
机构
[1] Salk Inst Biol Studies, Razavi Newman Ctr Bioinformat, La Jolla, CA 92037 USA
[2] Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Ctr Integrat Genom, Berkeley, CA 94720 USA
[4] SUNY Stony Brook, Dept Physiol & Biophys, Stony Brook, NY 11794 USA
关键词
choanoflagellate; evolution; genome; kinome; phosphotyrosine;
D O I
10.1073/pnas.0801314105
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Tyrosine kinase signaling has long been considered a hallmark of intercellular communication, unique to multicellular animals. Our genomic analysis of the unicellular choanoflagellate Monosiga brevicollis discovers a remarkable count of 128 tyrosine kinases, 38 tyrosine phosphatases, and 123 phosphotyrosine (pTyr)-binding SH2 proteins, all higher counts than seen in any metazoan. This elaborate signaling network shows little orthology to metazoan counterparts yet displays many innovations reminiscent of metazoans. These include extracellular domains structurally related to those of metazoan receptor kinases, alternative methods for membrane anchoring and phosphotyrosine interaction in cytoplasmic kinases, and domain combinations that link kinases to small GTPase signaling and transcription. These proteins also display a wealth of combinations of known signaling domains. This uniquely divergent and elaborate signaling network illuminates the early evolution of pTyr signaling, explores innovative ways to traverse the cellular signaling circuitry, and shows extensive convergent evolution, highlighting pervasive constraints on pTyr signaling.
引用
收藏
页码:9674 / 9679
页数:6
相关论文
共 30 条
[1]   The premetazoan ancestry of cadherins [J].
Abedin, Monika ;
King, Nicole .
SCIENCE, 2008, 319 (5865) :946-948
[2]   Protein tyrosine phosphatases in the human genome [J].
Alonso, A ;
Sasin, J ;
Bottini, N ;
Friedberg, I ;
Friedberg, I ;
Osterman, A ;
Godzik, A ;
Hunter, T ;
Dixon, J ;
Mustelin, T .
CELL, 2004, 117 (06) :699-711
[3]  
Bailey TL., 1994, P 2 INT C INT SYST M, V2, P28
[4]   Improved prediction of signal peptides: SignalP 3.0 [J].
Bendtsen, JD ;
Nielsen, H ;
von Heijne, G ;
Brunak, S .
JOURNAL OF MOLECULAR BIOLOGY, 2004, 340 (04) :783-795
[5]   A millennial myosin census [J].
Berg, JS ;
Powell, BC ;
Cheney, RE .
MOLECULAR BIOLOGY OF THE CELL, 2001, 12 (04) :780-794
[6]   The mouse kinome: Discovery and comparative genomics of all mouse protein kinases [J].
Caenepeel, S ;
Charydczak, G ;
Sudarsanam, S ;
Hunter, T ;
Manning, G .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (32) :11707-11712
[7]   HYR, an extracellular module involved in cellular adhesion and related to the immunoglobulin-like fold [J].
Callebaut, I ;
Gilgès, D ;
Vigon, I ;
Mornon, JP .
PROTEIN SCIENCE, 2000, 9 (07) :1382-1390
[8]  
CASNELLIE JE, 1991, METHOD ENZYMOL, V200, P115
[9]   Signaling - 2000 and beyond [J].
Hunter, T .
CELL, 2000, 100 (01) :113-127
[10]  
Kent WJ, 2002, GENOME RES, V12, P656, DOI [10.1101/gr.229202. Article published online before March 2002, 10.1101/gr.229202]