Spectral editing and pattern recognition methods applied to high-resolution magic-angle spinning 1H nuclear magnetic resonance spectroscopy of liver tissues

被引:204
作者
Wang, YL [1 ]
Bollard, ME [1 ]
Keun, H [1 ]
Antti, H [1 ]
Beckonert, O [1 ]
Ebbels, TM [1 ]
Lindon, JC [1 ]
Holmes, E [1 ]
Tang, HR [1 ]
Nicholson, JK [1 ]
机构
[1] Univ London Imperial Coll Sci Technol & Med, Fac Med, Div Biomed Sci, London SW7 2AZ, England
关键词
principal components analysis; metabonomics; HRMAS H-1 NMR spectroscopy; NMR spectral editing; liver tissue; hydrazine;
D O I
10.1016/j.ab.2003.07.026
中图分类号
Q5 [生物化学];
学科分类号
071010 [生物化学与分子生物学]; 081704 [应用化学];
摘要
Principal component analysis (PCA) has been applied to three nuclear magnetic resonance (NMR) spectral editing methods, namely, the Carr-Purcell-Meiboom-Gill spin-echo, diffusion editing, and skyline projection of a two-dimensional J-resolved spectrum, obtained from high-resolution magic-angle spinning NMR spectroscopy of liver tissues, to distinguish between control and hydrazine-treated rats. The effects of the toxin on rat liver biochemistry were directly observed and characterized by depleted levels of liver glycogen, choline, taurine, trimethylamine N-oxide, and glucose and by elevated levels of lipids and alanine. The highly unsaturated omega-3-type fatty acid was observed for the first time in hydrazine-treated rat liver. The contributions of the metabolites to the separation of control from dosed liver tissues varied depending on the type of spectral editing method used. We have shown that subtle changes in the metabolic profiles can be selectively amplified using a metabonomics approach based on the different NMR spectral editing techniques in conjunction with PCA. (C) 2003 Elsevier Inc. All rights reserved.
引用
收藏
页码:26 / 32
页数:7
相关论文
共 25 条
[1]
AMENTA JS, 1962, LAB INVEST, V11, P956
[2]
Beebe K.R., 1998, CHEMOMETRICS PRACTIC
[3]
Bollard ME, 2000, MAGNET RESON MED, V44, P201, DOI 10.1002/1522-2594(200008)44:2<201::AID-MRM6>3.0.CO
[4]
2-5
[5]
Investigations into biochemical changes due to diurnal variation and estrus cycle in female rats using high-resolution 1H NMR spectroscopy of urine and pattern recognition [J].
Bollard, ME ;
Holmes, E ;
Lindon, JC ;
Mitchell, SC ;
Branstetter, D ;
Zhang, W ;
Nicholson, JK .
ANALYTICAL BIOCHEMISTRY, 2001, 295 (02) :194-202
[6]
Cheng LL, 1998, CANCER RES, V58, P1825
[7]
Evaluating human breast ductal carcinomas with high-resolution magic-angle spinning proton magnetic resonance spectroscopy [J].
Cheng, LL ;
Chang, IW ;
Smith, BL ;
Gonzalez, RG .
JOURNAL OF MAGNETIC RESONANCE, 1998, 135 (01) :194-202
[8]
Non-destructive quantitation of spermine in human prostate tissue samples using HRMAS 1H NMR spectroscopy at 9.4 T [J].
Cheng, LL ;
Wu, CL ;
Smith, MR ;
Gonzalez, RG .
FEBS LETTERS, 2001, 494 (1-2) :112-116
[9]
High-resolution 1H NMR and magic angle spinning NMR spectroscopic investigation of the biochemical effects of 2-bromoethanamine in intact renal and hepatic tissue [J].
Garrod, S ;
Humpher, E ;
Connor, SC ;
Connelly, JC ;
Spraul, M ;
Nicholson, JK ;
Holmes, E .
MAGNETIC RESONANCE IN MEDICINE, 2001, 45 (05) :781-790
[10]
An NMR-based metabonomic approach to investigate the biochemical consequences of genetic strain differences:: application to the C57BL10J and Alpk:ApfCD mouse [J].
Gavaghan, CL ;
Holmes, E ;
Lenz, E ;
Wilson, ID ;
Nicholson, JK .
FEBS LETTERS, 2000, 484 (03) :169-174