Combining spectroscopic data (MS, IR): exploratory chemometric analysis for characterising similarity/diversity of chemical structures

被引:11
作者
Schoonjans, V [1 ]
Massart, DL [1 ]
机构
[1] Free Univ Brussels, Pharmaceut Inst, ChemAc, B-1090 Brussels, Belgium
关键词
mass spectra; spectral features; similarity; upgma-clustering; principal component analysis; sequential projection pursuit;
D O I
10.1016/S0731-7085(01)00427-7
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Combined infrared-mass spectra (IR-MS) have been used to examine a small data set of synthetic substances in order to elucidate whether a combination of spectral descriptors yield better classification and similarity predictions than their corresponding individual spectral descriptors. To eliminate differences in variation. a logarithmic transformation or log double-centering pretreatment was necessary. Principal component analysis (PCA) was applied to observe clusters of similar compounds. Hierarchical upgma-cluster analysis was also used for data classification. (C) 2001 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:225 / 239
页数:15
相关论文
共 15 条
[1]   Can we learn to distinguish between "drug-like" and "nondrug-like" molecules? [J].
Ajay ;
Walters, WP ;
Murcko, MA .
JOURNAL OF MEDICINAL CHEMISTRY, 1998, 41 (18) :3314-3324
[2]  
[Anonymous], 1983, INTERPRETATION ANAL
[3]   Computer-assisted IR spectra prediction - Linked similarity searches for structures and spectra [J].
Baumann, K ;
Clerc, JT .
ANALYTICA CHIMICA ACTA, 1997, 348 (1-3) :327-343
[4]   Molecular diversity and representativity in chemical databases [J].
Bayada, DM ;
Hamersma, H ;
van Geerestein, VJ .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1999, 39 (01) :1-10
[5]   Approaches to the design of combinatorial libraries [J].
Drewry, DH ;
Young, SS .
CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 1999, 48 (01) :1-20
[6]   PATTERN-RECOGNITION OF FOURIER-TRANSFORM INFRARED-SPECTRA OF ORGANIC-COMPOUNDS [J].
FRANKEL, DS .
ANALYTICAL CHEMISTRY, 1984, 56 (06) :1011-1014
[7]   Sequential projection pursuit using genetic algorithms for data mining of analytical data [J].
Guo, Q ;
Wu, W ;
Questier, F ;
Massart, DL ;
Boucon, C ;
de Jong, S .
ANALYTICAL CHEMISTRY, 2000, 72 (13) :2846-2855
[8]   Optimization and visualization of molecular diversity of combinatorial libraries [J].
Hassan, M ;
Bielawski, JP ;
Hempel, JC ;
Waldman, M .
MOLECULAR DIVERSITY, 1996, 2 (1-2) :64-74
[9]  
Kim K. H., 1995, MOL SIMILARITY DRUG
[10]  
MASSART DL, 1997, DATA HANDLING SC A B