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The SBASE protein domain library, release 6.0:: a collection of annotated protein sequence segments

被引：11
作者：
Murvai, J
Vlahovicek, K
Barta, E
Szepesvári, C
Acatrinei, C
Pongor, S
机构：
[1] Int Ctr Genet Engn & Biotechnol, I-34012 Trieste, Italy
[2] ABC Inst Biochem & Prot Res, H-2100 Godollo, Hungary
[3] Attila Jozsef Univ, Res Grp Artificial Intelligence, H-6700 Szeged, Hungary
来源：
NUCLEIC ACIDS RESEARCH | 1999年 / 27卷 / 01期
关键词：
D O I：
10.1093/nar/27.1.257
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
The sixth release of the SBASE protein domain library sequences contains 130703 annotated and cross-referenced entries corresponding to structural, functional, ligand-binding and topogenic segments of proteins. The entries were grouped based on standard names (2312 groups) and futher classified on the basis of the BLAST similarity (2463 clusters). Automated searching with BLAST and a new sequence-plot representation of local domain similarities are available at the WWW-server http://www.icgeb.trieste.it/sbase. A mirror site is at http://sbase.abc.hu/sbase. The database is freely available by anonymous 'ftp' file transfer from ftp.icgeb.trieste.it.
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收藏
页码：257 / 259
页数：3
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