Parallel genomic evolution and metabolic interdependence in an ancient symbiosis

被引:276
作者
McCutcheon, John P.
Moran, Nancy A.
机构
[1] Univ Arizona, Dept Ecol & Evolutionary Biol, Tucson, AZ 85721 USA
[2] Univ Arizona, Ctr Insect Sci, Tucson, AZ 85721 USA
关键词
Bacteroidetes; insects; pyrosequencing; Sharpshooters; genome reduction;
D O I
10.1073/pnas.0708855104
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Obligate symbioses with nutrient-provisioning bacteria have originated often during animal evolution and have been key to the ecological diversification of many invertebrate groups. To date, genome sequences of insect nutritional symbionts have been restricted to a related cluster within Gammaproteobacteria and have revealed distinctive features, including extreme reduction, rapid evolution, and biased nucleotide composition. Using recently developed sequencing technologies, we show that Sulcia muelleri, a member of the Bacteroidetes, underwent similar genomic changes during coevolution with its sap-feeding insect host (sharpshooters) and the coresident symbiont Baumannia cicadellinicola (Gammaproteobacteria). At 245 kilobases, Sulcia's genome is approximately one tenth of the smallest known Bacteroidetes genome and among the smallest for any cellular organism. Analysis of the coding capacities of Sulcia and Baumannia reveals striking complementarity in metabolic capabilities.
引用
收藏
页码:19392 / 19397
页数:6
相关论文
共 52 条
[1]   Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia [J].
Akman, L ;
Yamashita, A ;
Watanabe, H ;
Oshima, K ;
Shiba, T ;
Hattori, M ;
Aksoy, S .
NATURE GENETICS, 2002, 32 (03) :402-407
[2]   High local and global diversity of Flavobacteria in marine plankton [J].
Alonso, Cecilia ;
Warnecke, Falk ;
Amann, Rudolf ;
Pernthaler, Jakob .
ENVIRONMENTAL MICROBIOLOGY, 2007, 9 (05) :1253-1266
[3]   FEEDING BY THE LEAFHOPPER, HOMALODISCA-COAGULATA, IN RELATION TO XYLEM FLUID CHEMISTRY AND TENSION [J].
ANDERSEN, PC ;
BRODBECK, BV ;
MIZELL, RF .
JOURNAL OF INSECT PHYSIOLOGY, 1992, 38 (08) :611-622
[4]  
[Anonymous], 1989, Cladistics, DOI DOI 10.1111/J.1096-0031.1989.TB00562.X
[5]  
Bateman A, 2002, NUCLEIC ACIDS RES, V30, P276, DOI [10.1093/nar/gkr1065, 10.1093/nar/gkp985, 10.1093/nar/gkh121]
[6]   Tandem repeats finder: a program to analyze DNA sequences [J].
Benson, G .
NUCLEIC ACIDS RESEARCH, 1999, 27 (02) :573-580
[7]   Whole-genome re-sequencing [J].
Bentley, David R. .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2006, 16 (06) :545-552
[8]   Universal trees based on large combined protein sequence data sets [J].
Brown, JR ;
Douady, CJ ;
Italia, MJ ;
Marshall, WE ;
Stanhope, MJ .
NATURE GENETICS, 2001, 28 (03) :281-285
[9]   Bacterial fatty acid biosynthesis: Targets for antibacterial drug discovery [J].
Campbell, JW ;
Cronan, JE .
ANNUAL REVIEW OF MICROBIOLOGY, 2001, 55 :305-332
[10]   MetaCyc: a multiorganism database of metabolic pathways and enzymes [J].
Caspi, Ron ;
Foerster, Hartmut ;
Fulcher, Carol A. ;
Hopkinson, Rebecca ;
Ingraham, John ;
Kaipa, Pallavi ;
Krummenacker, Markus ;
Paley, Suzanne ;
Pick, John ;
Rhee, Seung Y. ;
Tissier, Christophe ;
Zhang, Peifen ;
Karp, Peter D. .
NUCLEIC ACIDS RESEARCH, 2006, 34 :D511-D516