Combining genome-wide data from humans and animal models of dyslipidemia and atherosclerosis

被引:4
作者
Berisha, Stela Z. [1 ]
Smith, Jonathan D. [1 ,2 ]
机构
[1] Cleveland Clin, Dept Cell Biol, Lerner Res Inst, Cleveland, OH 44195 USA
[2] Case Western Reserve Univ, Dept Mol Med, Cleveland Clin, Lerner Coll Med, Cleveland, OH 44106 USA
关键词
atherosclerosis; comparative genomics; cross-species expression quantitative trait loci; cross-species quantitative trait loci; dyslipidemia; QUANTITATIVE TRAIT LOCI; CORONARY-ARTERY-DISEASE; DENSITY-LIPOPROTEIN CHOLESTEROL; HDL-CHOLESTEROL; ASSOCIATION ANALYSIS; BIOINFORMATICS TOOLBOX; LIPID CONCENTRATIONS; TRIGLYCERIDE LEVELS; GENES; RISK;
D O I
10.1097/MOL.0b013e328342a375
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Purpose of review Comparative genomics allows researchers to combine genome-wide association data from humans with studies in animal models in order to assist in the identification of the genes and the genetic variants that modify susceptibility to dyslipidemia and atherosclerosis. Recent findings Association and linkage studies in human and rodent species have been successful in identifying genetic loci associated with complex traits, but have been less robust in identifying and validating the responsible gene and/or genetic variants. Recent technological advancements have assisted in the development of comparative genomic approaches, which rely on the combination of human and rodent datasets and bioinformatics tools, followed by the narrowing of concordant loci and improved identification of candidate genes and genetic variants. Additionally, candidate genes and genetic variants identified by these methods have been further validated and functionally investigated in animal models, a process that is not feasible in humans. Summary Comparative genomic approaches have led to the identification and validation of several new genes, including a few not previously implicated, as modifiers of plasma lipid levels and atherosclerosis, yielding new insights into the biological mechanisms of these complex traits.
引用
收藏
页码:100 / 105
页数:6
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