Chemical cross-linking and mass spectrometry for protein structural modeling

被引：187

作者：

Back, JW ^{[1
]}

de Jong, L ^{[1
]}

Muijsers, AO ^{[1
]}

de Koster, CG ^{[1
]}

机构：

[1] Univ Amsterdam, Mass Spectrometry Grp, SILS, NL-1018 WV Amsterdam, Netherlands

来源：

JOURNAL OF MOLECULAR BIOLOGY | 2003年 / 331卷 / 02期

关键词：

cross-linking; mass spectrometry; restraints; protein modeling; integration of techniques;

D O I：

10.1016/S0022-2836(03)00721-6

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The growth of gene and protein sequence information is currently so rapid that three-dimensional structural information is lacking for the overwhelming majority of known proteins. In this review, efforts towards rapid and sensitive methods for protein structural characterization are described, complementing existing technologies. Based on chemical cross-linking and offering the analytical speed and sensitivity of mass spectrometry these methodologies are thought to contribute valuable tools towards future high throughput protein structure elucidation. (C) 2003 Elsevier Ltd. All rights reserved.

引用

页码：303 / 313

页数：11

共 75 条

[1] ALBRECHT M, 2002, SILICO BIOL, V2, P1
[2] Mapping protein-protein interactions in the bacteriophage T4 DNA polymerase holoenzyme using a novel trifunctional photo-cross-linking and affinity reagent
Alley, SC
Ishmael, FT
Jones, AD
Benkovic, SJ
[J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (25) : 6126 - 6127
[3] Building a replisome solution structure by elucidation of protein-protein interactions in the bacteriophage T4 DNA polymerise holoenzyme
Alley, SC
Trakselis, MA
Mayer, MU
Ishmael, FT
Jones, AD
Benkovic, SJ
[J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (42) : 39340 - 39349
[4] Charge-reduced nano electrospray ionization combined with differential mobility analysis of peptides, proteins, glycoproteins, noncovalent protein complexes and viruses
Bacher, G
Szymanski, WW
Kaufman, SL
Zöllner, P
Blaas, D
Allmaier, G
[J]. JOURNAL OF MASS SPECTROMETRY, 2001, 36 (09): : 1038 - 1052
[5] A structure for the yeast prohibitin complex: Structure prediction and evidence from chemical crosslinking and mass spectrometry
Back, JW
Sanz, MA
De Jong, L
De Koning, LJ
Nijtmans, LGJ
De Koster, CG
Grivell, LA
Van der Spek, H
Muijsers, AO
[J]. PROTEIN SCIENCE, 2002, 11 (10) : 2471 - 2478
[6] Identification of cross-linked peptides for protein interaction studies using mass spectrometry and 18O labeling
Back, JW
Notenboom, V
de Koning, LJ
Muijsers, AO
Sixma, TK
de Koster, CG
de Jong, LZ
[J]. ANALYTICAL CHEMISTRY, 2002, 74 (17) : 4417 - 4422
[7] A new crosslinker for mass spectrometric analysis of the quaternary structure of protein complexes
Back, JW
Hartog, AF
Dekker, HL
Muijsers, AO
de Koning, LJ
de Jong, L
[J]. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2001, 12 (02) : 222 - 227
[8] Biochemical and molecular approaches to understanding protein import into peroxisomes
Baker, A
Charlton, W
Johnson, B
Lopez-Huertas, E
Oh, J
Sparkes, I
Thomas, J
[J]. BIOCHEMICAL SOCIETY TRANSACTIONS, 2000, 28 : 499 - 504
[9] Protein structure prediction and structural genomics
Baker, D
Sali, A
[J]. SCIENCE, 2001, 294 (5540) : 93 - 96
[10] The database of ribosomal cross-links: an update
Baranov, PV
Kubarenko, AV
Gurvich, OL
Shamolina, TA
Brimacombe, R
[J]. NUCLEIC ACIDS RESEARCH, 1999, 27 (01) : 184 - 185

← 1 2 3 4 5 6 7 8 →