Conformational behavior of macromolecules in solution.: Homopolypeptides of α-aminoisobutyric acid as test cases

被引:30
作者
Improta, R [1 ]
Rega, N [1 ]
Aleman, C [1 ]
Barone, V [1 ]
机构
[1] Univ Politecn Cataluna, ETS Engn Ind Barcelona, Dept Engn, E-08028 Barcelona, Spain
关键词
D O I
10.1021/ma0106503
中图分类号
O63 [高分子化学(高聚物)];
学科分类号
070305 ; 080501 ; 081704 ;
摘要
Solvent effects on the conformational preferences of homopolypeptides constituted by alpha -aminoisobutyric acid (polyAib) have been investigated coupling the polarizable continuum model (PCM) either to a quantum mechanical (PBE0/6-31G(d)) or to a molecular-mechanical (Amber) representation of the solute. The results allow a deeper insight into the influence of the solvent on the 3(10)/alpha -helix equilibrium in polyAib and show that PCM/Amber is a useful tool to study the conformational preferences of large peptides in condensed phase. As a matter of fact, all the PCM/Amber results are close to their PCM/PBE0 counterparts, except for some underestimation of the absolute solvation energies in polar solvents.
引用
收藏
页码:7550 / 7557
页数:8
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