Zinc enzymes

被引:343
作者
Coleman, JE [1 ]
机构
[1] Yale Univ, Dept Mol Biophys & Biochem, New Haven, CT 06520 USA
关键词
D O I
10.1016/S1367-5931(98)80064-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The number of zinc enzymes for which detailed structural and mechanistic data, including high resolution crystal structures, are available is increasing rapidly. The new findings continue to support the conclusion that the majority of zinc enzymes catalyze hydrolysis or closely related transfer reactions. In a protein environment, tetrahedral or B-coordinate Zn2+ is ideally suited to activate a coordinated water (frequently a Zn2+--OH) as a nucleophile attacking the carbonyl carbon of a peptide bond, the carbon of carbon dioxide or the phosphorus of a phosphate ester. Protein-bound Zn2+ can function catalytically by forming mixed complexes with the substrate, either by expanding its coordination sphere or by exchanging a ligand. Formation of protein-Zn2+-substrate bonds can position the substrate or polarize its electron distribution to facilitate further steps in the reaction.
引用
收藏
页码:222 / 234
页数:13
相关论文
共 47 条
[1]   Crystal structure of the RAG1 dimerization domain reveals multiple zinc-binding motifs including a novel zinc binuclear cluster [J].
Bellon, SF ;
Rodgers, KK ;
Schatz, DG ;
Coleman, JE ;
Steitz, TA .
NATURE STRUCTURAL BIOLOGY, 1997, 4 (07) :586-591
[2]   Novel active site in Escherichia coli fructose 1,6-bisphosphate aldolase [J].
Blom, NS ;
Tetreault, S ;
Coulombe, R ;
Sygusch, J .
NATURE STRUCTURAL BIOLOGY, 1996, 3 (10) :856-862
[3]   STRUCTURE DETERMINATION OF MURINE MITOCHONDRIAL CARBONIC-ANHYDRASE-V AT 2.45-ANGSTROM RESOLUTION - IMPLICATIONS FOR CATALYTIC PROTON-TRANSFER AND INHIBITOR DESIGN [J].
BORIACKSJODIN, PA ;
HECK, RW ;
LAIPIS, PJ ;
SILVERMAN, DN ;
CHRISTIANSON, DW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (24) :10949-10953
[4]  
CARFI A, 1995, EMBO J, V14, P4919
[5]   CRYSTAL-STRUCTURE OF AEROMONAS-PROTEOLYTICA AMINOPEPTIDASE - A PROTOTYPICAL MEMBER OF THE CO-CATALYTIC ZINC ENZYME FAMILY [J].
CHEVRIER, B ;
SCHALK, C ;
DORCHYMONT, H ;
RONDEAU, JM ;
TARNUS, C ;
MORAS, D .
STRUCTURE, 1994, 2 (04) :283-291
[6]   The structure of the Aeromonas proteolytica aminopeptidase complexed with a hydroxamate inhibitor - Involvement in catalysis of Glu151 and two zinc ions of the co-catalytic unit [J].
Chevrier, B ;
DOrchymont, H ;
Schalk, C ;
Tarnus, C ;
Moras, D .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1996, 237 (02) :393-398
[7]  
COLEMAN JE, 1967, J BIOL CHEM, V242, P5212
[8]  
COLEMAN JE, 1992, ANNU REV BIOPH BIOM, V21, P441, DOI 10.1146/annurev.biophys.21.1.441
[9]  
Concha NO, 1997, PROTEIN SCI, V6, P2671
[10]   Crystal structure of the wide-spectrum binuclear zinc beta-lactamase from Bacteroides fragilis [J].
Concha, NO ;
Rasmussen, BA ;
Bush, K ;
Herzberg, O .
STRUCTURE, 1996, 4 (07) :823-836