共 73 条
Crosstalk between genetic and epigenetic information through cytosine deamination
被引:31
作者:

Chahwan, Richard
论文数: 0 引用数: 0
h-index: 0
机构:
Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10461 USA Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10461 USA

Wontakal, Sandeep N.
论文数: 0 引用数: 0
h-index: 0
机构:
Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10461 USA Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10461 USA

Roa, Sergio
论文数: 0 引用数: 0
h-index: 0
机构:
Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10461 USA Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10461 USA
机构:
[1] Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10461 USA
关键词:
INDUCED CYTIDINE DEAMINASE;
SINGLE-STRANDED-DNA;
RNA EDITING ENZYME;
SOMATIC HYPERMUTATION;
ANTIBODY DIVERSIFICATION;
B-CELLS;
AID/APOBEC FAMILY;
DRUG-RESISTANCE;
PATERNAL GENOME;
AID DEFICIENCY;
D O I:
10.1016/j.tig.2010.07.005
中图分类号:
Q3 [遗传学];
学科分类号:
071007 ;
090102 ;
摘要:
Decades of work have elucidated the existence of two forms of heritable information, namely genetic and epigenetic, which are collectively referred to as the 'dual inheritance'. The underlying mechanisms behind these two modes of inheritance have so far remained distinct. Cytosine deaminases, such as activation-induced cytidine deaminase (AID) and other members of the APOBEC family, have been implicated both in genetic variation of somatic cells and in epigenetic remodeling of germ and pluripotent cells. We hereby synthesize these seemingly dissociated functions into one coherent model, and further suggest that cytosine deaminases, particularly AID, might have a broader influence by modulating epigenetic information in somatic or cancer cells, as well as by triggering genetic variation in germ and pluripotent cells through mutation followed by natural selection. We therefore propose that the AID/APOBEC family of deaminases are likely to have acted as drivers throughout vertebrate evolution.
引用
收藏
页码:443 / 448
页数:6
相关论文
共 73 条
[1]
Gadd45a promotes epigenetic gene activation by repair-mediated DNA demethylation
[J].
Barreto, Guillermo
;
Schaefer, Andrea
;
Marhold, Joachim
;
Stach, Dirk
;
Swaminathan, Suresh K.
;
Handa, Vikas
;
Doederlein, Gabi
;
Maltry, Nicole
;
Wu, Wei
;
Lyko, Frank
;
Niehrs, Christof
.
NATURE,
2007, 445 (7128)
:671-675

Barreto, Guillermo
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Schaefer, Andrea
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Marhold, Joachim
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Stach, Dirk
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Swaminathan, Suresh K.
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Handa, Vikas
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Doederlein, Gabi
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Maltry, Nicole
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Wu, Wei
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Lyko, Frank
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany

Niehrs, Christof
论文数: 0 引用数: 0
h-index: 0
机构:
German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany German Canc Res Ctr, Div Mol Embryol, D-69120 Heidelberg, Germany
[2]
Reprogramming towards pluripotency requires AID-dependent DNA demethylation
[J].
Bhutani, Nidhi
;
Brady, Jennifer J.
;
Damian, Mara
;
Sacco, Alessandra
;
Corbel, Stephane Y.
;
Blau, Helen M.
.
NATURE,
2010, 463 (7284)
:1042-U57

Bhutani, Nidhi
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA

Brady, Jennifer J.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA

Damian, Mara
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA
Stanford Univ, Dept Biol, Stanford, CA 94305 USA Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA

Sacco, Alessandra
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA

Corbel, Stephane Y.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA

Blau, Helen M.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA Stanford Univ, Dept Microbiol & Immunol, Baxter Lab Stem Cell Biol, Inst Stem Cell Biol & Regenerat Med,Sch Med, Stanford, CA 94305 USA
[3]
DNA methylation patterns and epigenetic memory
[J].
Bird, A
.
GENES & DEVELOPMENT,
2002, 16 (01)
:6-21

Bird, A
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Edinburgh, Wellcome Trust Ctr Cell Biol, Edinburgh EH9 3JR, Midlothian, Scotland Univ Edinburgh, Wellcome Trust Ctr Cell Biol, Edinburgh EH9 3JR, Midlothian, Scotland
[4]
DNA METHYLATION AND THE FREQUENCY OF CPG IN ANIMAL DNA
[J].
BIRD, AP
.
NUCLEIC ACIDS RESEARCH,
1980, 8 (07)
:1499-1504

BIRD, AP
论文数: 0 引用数: 0
h-index: 0
[5]
Activation-induced cytidine deaminase deaminates deoxycytidine on single-stranded DNA but requires the action of RNase
[J].
Bransteitter, R
;
Pham, P
;
Scharff, MD
;
Goodman, MF
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2003, 100 (07)
:4102-4107

Bransteitter, R
论文数: 0 引用数: 0
h-index: 0
机构: Univ So Calif, Dept Biol Sci, Hedco Mol Biol Labs, Los Angeles, CA 90089 USA

Pham, P
论文数: 0 引用数: 0
h-index: 0
机构: Univ So Calif, Dept Biol Sci, Hedco Mol Biol Labs, Los Angeles, CA 90089 USA

Scharff, MD
论文数: 0 引用数: 0
h-index: 0
机构: Univ So Calif, Dept Biol Sci, Hedco Mol Biol Labs, Los Angeles, CA 90089 USA

Goodman, MF
论文数: 0 引用数: 0
h-index: 0
机构: Univ So Calif, Dept Biol Sci, Hedco Mol Biol Labs, Los Angeles, CA 90089 USA
[6]
Selective, stable demethylation of the interleukin-2 gene enhances transcription by an active process
[J].
Bruniquel, D
;
Schwartz, RH
.
NATURE IMMUNOLOGY,
2003, 4 (03)
:235-240

Bruniquel, D
论文数: 0 引用数: 0
h-index: 0
机构:
NIAID, Cellular & Mol Immunol Lab, NIH, Bethesda, MD 20892 USA NIAID, Cellular & Mol Immunol Lab, NIH, Bethesda, MD 20892 USA

Schwartz, RH
论文数: 0 引用数: 0
h-index: 0
机构:
NIAID, Cellular & Mol Immunol Lab, NIH, Bethesda, MD 20892 USA NIAID, Cellular & Mol Immunol Lab, NIH, Bethesda, MD 20892 USA
[7]
Epimutations in Prader-Willi and Angelman syndromes: A molecular study of 136 patients with an imprinting defect
[J].
Buiting, K
;
Gross, S
;
Lich, C
;
Gillessen-Kaesbach, G
;
El-Maarri, O
;
Horsthemke, B
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2003, 72 (03)
:571-577

Buiting, K
论文数: 0 引用数: 0
h-index: 0
机构: Univ Essen Gesamthsch Klinikum, Inst Humangenet, D-45122 Essen, Germany

Gross, S
论文数: 0 引用数: 0
h-index: 0
机构: Univ Essen Gesamthsch Klinikum, Inst Humangenet, D-45122 Essen, Germany

Lich, C
论文数: 0 引用数: 0
h-index: 0
机构: Univ Essen Gesamthsch Klinikum, Inst Humangenet, D-45122 Essen, Germany

Gillessen-Kaesbach, G
论文数: 0 引用数: 0
h-index: 0
机构: Univ Essen Gesamthsch Klinikum, Inst Humangenet, D-45122 Essen, Germany

El-Maarri, O
论文数: 0 引用数: 0
h-index: 0
机构: Univ Essen Gesamthsch Klinikum, Inst Humangenet, D-45122 Essen, Germany

Horsthemke, B
论文数: 0 引用数: 0
h-index: 0
机构: Univ Essen Gesamthsch Klinikum, Inst Humangenet, D-45122 Essen, Germany
[8]
PROPERTIES AND LOCALIZATION OF DNA METHYLTRANSFERASE IN PREIMPLANTATION MOUSE EMBRYOS - IMPLICATIONS FOR GENOMIC IMPRINTING
[J].
CARLSON, LL
;
PAGE, AW
;
BESTOR, TH
.
GENES & DEVELOPMENT,
1992, 6 (12B)
:2536-2541

CARLSON, LL
论文数: 0 引用数: 0
h-index: 0
机构:
HARVARD UNIV,SCH MED,DEPT ANAT & CELLULAR BIOL,HUMAN REPROD & REPROD BIOL LAB,BOSTON,MA 02115 HARVARD UNIV,SCH MED,DEPT ANAT & CELLULAR BIOL,HUMAN REPROD & REPROD BIOL LAB,BOSTON,MA 02115

PAGE, AW
论文数: 0 引用数: 0
h-index: 0
机构:
HARVARD UNIV,SCH MED,DEPT ANAT & CELLULAR BIOL,HUMAN REPROD & REPROD BIOL LAB,BOSTON,MA 02115 HARVARD UNIV,SCH MED,DEPT ANAT & CELLULAR BIOL,HUMAN REPROD & REPROD BIOL LAB,BOSTON,MA 02115

BESTOR, TH
论文数: 0 引用数: 0
h-index: 0
机构:
HARVARD UNIV,SCH MED,DEPT ANAT & CELLULAR BIOL,HUMAN REPROD & REPROD BIOL LAB,BOSTON,MA 02115 HARVARD UNIV,SCH MED,DEPT ANAT & CELLULAR BIOL,HUMAN REPROD & REPROD BIOL LAB,BOSTON,MA 02115
[9]
Transcription-targeted DNA deamination by the AID antibody diversification enzyme
[J].
Chaudhuri, J
;
Tian, M
;
Khuong, C
;
Chua, K
;
Pinaud, E
;
Alt, FW
.
NATURE,
2003, 422 (6933)
:726-730

Chaudhuri, J
论文数: 0 引用数: 0
h-index: 0
机构: Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA

Tian, M
论文数: 0 引用数: 0
h-index: 0
机构: Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA

Khuong, C
论文数: 0 引用数: 0
h-index: 0
机构: Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA

Chua, K
论文数: 0 引用数: 0
h-index: 0
机构: Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA

Pinaud, E
论文数: 0 引用数: 0
h-index: 0
机构: Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA

Alt, FW
论文数: 0 引用数: 0
h-index: 0
机构:
Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA Childrens Hosp, Howard Hughes Med Inst, Ctr Blood Res, Boston, MA 02115 USA
[10]
Evolution of the AID/APOBEC family of polynucleotide (deoxy)cytidine deaminases
[J].
Conticello, SG
;
Thomas, CJF
;
Petersen-Mahrt, SK
;
Neuberger, MS
.
MOLECULAR BIOLOGY AND EVOLUTION,
2005, 22 (02)
:367-377

Conticello, SG
论文数: 0 引用数: 0
h-index: 0
机构:
MRC, Mol Biol Lab, Cambridge CB2 2QH, England MRC, Mol Biol Lab, Cambridge CB2 2QH, England

Thomas, CJF
论文数: 0 引用数: 0
h-index: 0
机构:
MRC, Mol Biol Lab, Cambridge CB2 2QH, England MRC, Mol Biol Lab, Cambridge CB2 2QH, England

Petersen-Mahrt, SK
论文数: 0 引用数: 0
h-index: 0
机构:
MRC, Mol Biol Lab, Cambridge CB2 2QH, England MRC, Mol Biol Lab, Cambridge CB2 2QH, England

Neuberger, MS
论文数: 0 引用数: 0
h-index: 0
机构:
MRC, Mol Biol Lab, Cambridge CB2 2QH, England MRC, Mol Biol Lab, Cambridge CB2 2QH, England