2HAPI: a microarray data analysis system

被引：3

作者：

Fink, JL

Drewes, S

Patel, H

Welsh, JB

Masys, DR

Corbeil, J

Gribskov, MR

机构：

[1] Univ Calif San Diego, San Diego Supercomp Ctr, La Jolla, CA 92093 USA

[2] Univ Calif San Diego, Dept Biol, La Jolla, CA 92093 USA

[3] Johnson & Johnson Phamraceut Res & Dev LLC, San Diego, CA 92161 USA

[4] Univ Calif San Diego, Sch Med, San Diego, CA 92093 USA

[5] Vet Med Res Fdn, San Diego, CA 92161 USA

来源：

BIOINFORMATICS | 2003年 / 19卷 / 11期

关键词：

D O I：

10.1093/bioinformatics/btg169

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

2HAPI (version 2 of High density Array Pattern Interpreter) is a web-based, publicly-available analytical tool designed to aid researchers in microarray data analysis. 2HAPI includes tools for searching, manipulating, visualizing, and clustering the large sets of data generated by microarray experiments. Other features include association of genes with NCBI information and linkage to external data resources. Unique to 2HAPI is the ability to retrieve upstream sequences of co-regulated genes for promoter analysis using MEME (Multiple Expectation-maximization for Motif Elicitation).

引用

页码：1443 / 1445

页数：3

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