Lysobacter concretionis sp. nov., isolated from anaerobic granules in an upflow anaerobic sludge blanket reactor

被引:63
作者
Bae, HS
Im, WT
Lee, ST
机构
[1] Korea Adv Inst Sci & Technol, Dept Biol Sci, Taejon 305701, South Korea
[2] Louisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USA
关键词
D O I
10.1099/ijs.0.63399-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The taxonomic positions of Lysobacter species with validly published names and a novel strain Ko07(11:0)(T, which was newly isolated from an upflow anaerobic sludge blanket reactor treating wastewater from a brewery, were (re)estimated on the basis of results obtained by using a polyphasic taxonomy approach. Phylogenetic inference based on 16S rRNA gene sequences showed that strain Ko07T and all Lysobacter species with validly published names clustered together in a phylogenetic branch within the class 'Gammaproteobacteria'. The sequence similarity of strain Ko07T to the type strains of established Lysobacter species was in the range 94.9-96.7%. Ubiquinone Q-8 and branched fatty acids, C) (iso, C)(15:0) (iso, C)(16:0) (iso, iso C)(17:1) (w9c and C)(11:0) iso 3OH, predominantly appeared in strain Ko07T as well as in all type strains of the recognized Lysobacter species. The DNA-DNA hybridization values of strain Ko07T with those of recognized Lysobacter species were estimated to be 2-20 %. Despite sharing common taxonomic features in important phenotypic characteristics, such as gliding movement, long-rod shape and proteolytic activity, strain Ko07T could be distinguished from the Lysobacter species with validly published names by its low DNA-DNA hybridization value, a comparatively low DNA G + C content (63.8 mol%), substrate utilization and some physiochemical characteristics. On the basis of the results obtained in this study, it is proposed that strain Ko07T should be classified as representing a novel member of the genus Lysobacter, for which the name Lysobacter concretionis sp. nov. is proposed. The type strain is Ko07T (= KCTC 12205T = DSM 16239T).
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页码:1155 / 1161
页数:7
相关论文
共 28 条
[1]  
Atlas R. M., 1993, HDB MICROBIOLOGICAL
[2]   Layered structure of granules in upflow anaerobic sludge blanket reactor gives microbial populations resistance to metal ions [J].
Bae, JW ;
Rhee, SK ;
Hyun, SH ;
Kim, IS ;
Lee, ST .
BIOTECHNOLOGY LETTERS, 2000, 22 (24) :1935-1940
[3]   Layered structure of UASB granules gives microbial populations resistance to toxic chemicals [J].
Bae, JW ;
Lee, ST .
BIOTECHNOLOGY LETTERS, 1999, 21 (02) :159-162
[4]  
Braker G, 1998, APPL ENVIRON MICROB, V64, P3769
[5]   LYSOBACTER, A NEW GENUS OF NON-FRUITING, GLIDING BACTERIA WITH A HIGH BASE RATIO [J].
CHRISTENSEN, P ;
COOK, FD .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1978, 28 (03) :367-393
[6]   USE OF ANAEROBIC-DIGESTION FOR WASTEWATER-TREATMENT [J].
DEZEEUW, WJ ;
LETTINGA, G .
ANTONIE VAN LEEUWENHOEK JOURNAL OF MICROBIOLOGY, 1980, 46 (01) :110-112
[7]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229
[8]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
[9]   CHARACTERISTICS OF GRANULAR METHANOGENIC SLUDGE GROWN ON LACTATE IN A UASB REACTOR [J].
FUKUZAKI, S ;
CHANG, YJ ;
NISHIO, N ;
NAGAI, S .
JOURNAL OF FERMENTATION AND BIOENGINEERING, 1991, 72 (06) :465-472
[10]  
Hall T.A., 1999, NUCL ACIDS S SER, V41, P95, DOI DOI 10.1021/BK-1999-0734.CH008