Methods for sequential resonance assignment in solid, uniformly 13C, 15N labelled peptides:: Quantification and application to antamanide

被引:89
作者
Detken, A
Hardy, EH
Ernst, M
Kainosho, M
Kawakami, T
Aimoto, S
Meier, BH [1 ]
机构
[1] ETH Honggerberg, Phys Chem Lab, CH-8093 Zurich, Switzerland
[2] Tokyo Metropolitan Univ, CREST, Japan Sci & Technol Corp, Hachioji, Tokyo 1920397, Japan
[3] Osaka Univ, Inst Prot Res, Suita, Osaka 5650871, Japan
关键词
adiabatic; antamanide; assignment; cross polarization; DREAM; MAS; polarization transfer; solid-state NMR; TOBSY; TOSSY;
D O I
10.1023/A:1011212100630
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The application of adiabatic polarization-transfer experiments to resonance assignment in solid, uniformly C-13-N-15-labelled polypeptides is demonstrated for the cyclic decapeptide antamanide. A homonuclear correlation experiment employing the DREAM sequence for adiabatic dipolar transfer yields a complete assignment of the C-alpha and aliphatic side-chain C-13 resonances to amino acid types. The same information can be obtained from a TOBSY experiment using the recently introduced P9(12)(1) TOBSY sequence, which employs the J couplings as a transfer mechanism. A comparison of the two methods is presented. Except for some aromatic phenylalanine resonances, a complete sequence-specific assignment of the C-13 and N-15 resonances in antamanide is achieved by a series of selective or broadband adiabatic triple-resonance experiments. Heteronuclear transfer by adiabatic-passage Hartmann-Hahn cross polarization is combined with adiabatic homonuclear transfer by the DREAM and rotational-resonance tickling sequences into two- and three-dimensional experiments. The performance of these experiments is evaluated quantitatively.
引用
收藏
页码:203 / 221
页数:19
相关论文
共 50 条
[1]   Efficient N-15-C-13 polarization transfer by adiabatic-passage Hartmann-Hahn cross polarization [J].
Baldus, M ;
Geurts, DG ;
Hediger, S ;
Meier, BH .
JOURNAL OF MAGNETIC RESONANCE SERIES A, 1996, 118 (01) :140-144
[2]  
Baldus M, 1998, MOL PHYS, V95, P1197, DOI 10.1080/00268979809483251
[3]   Total correlation spectroscopy in the solid state. The use of scalar couplings to determine the through-bond connectivity [J].
Baldus, M ;
Meier, BH .
JOURNAL OF MAGNETIC RESONANCE SERIES A, 1996, 121 (01) :65-69
[4]  
BALDUS M, 1996, THESIS ETH ZURICH
[5]   HETERONUCLEAR DECOUPLING IN ROTATING SOLIDS [J].
BENNETT, AE ;
RIENSTRA, CM ;
AUGER, M ;
LAKSHMI, KV ;
GRIFFIN, RG .
JOURNAL OF CHEMICAL PHYSICS, 1995, 103 (16) :6951-6958
[6]  
BRAUNSCHWEILER L, 1983, J MAGN RESON, V53, P512
[7]  
Bystrov V. F., 1976, PROGR NMR SPECTROSCO, V10, P41
[8]   Rotational resonance tickling: Accurate internuclear distance measurement in solids [J].
Costa, PR ;
Sun, BQ ;
Griffin, RG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (44) :10821-10830
[9]  
ERNST M, 1993, THESIS ETH ZURICH
[10]   2D AND 3D NMR-SPECTROSCOPY EMPLOYING C-13-C-13 MAGNETIZATION TRANSFER BY ISOTROPIC MIXING - SPIN SYSTEM-IDENTIFICATION IN LARGE PROTEINS [J].
FESIK, SW ;
EATON, HL ;
OLEJNICZAK, ET ;
ZUIDERWEG, ERP ;
MCINTOSH, LP ;
DAHLQUIST, FW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (02) :886-888