Metagenomic analyses of an uncultured viral community from human feces

被引：510

作者：

Breitbart, M

Hewson, I

Felts, B

Mahaffy, JM

Nulton, J

Salamon, P

Rohwer, F

机构：

[1] San Diego State Univ, Dept Biol, San Diego, CA 92182 USA

[2] San Diego State Univ, Dept Math Sci, San Diego, CA 92182 USA

[3] San Diego State Univ, Ctr Microbial Sci, San Diego, CA 92182 USA

[4] Univ So Calif, Dept Biol, Los Angeles, CA 90089 USA

来源：

JOURNAL OF BACTERIOLOGY | 2003年 / 185卷 / 20期

关键词：

D O I：

10.1128/JB.185.20.6220-6223.2003

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Here we present the first metagenomic analyses of an uncultured viral community from human feces, using partial shotgun sequencing. Most of the sequences were unrelated to anything previously reported. The recognizable viruses were mostly siphophages, and the community contained an estimated 1,200 viral genotypes.

引用

页码：6220 / 6223

页数：4

共 37 条

[1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Altschul, SF
Madden, TL
Schaffer, AA
Zhang, JH
Zhang, Z
Miller, W
Lipman, DJ
[J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
[2] ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[3] Genomic analysis of uncultured marine viral communities
Breitbart, M
Salamon, P
Andresen, B
Mahaffy, JM
Segall, AM
Mead, D
Azam, F
Rohwer, F
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (22) : 14250 - 14255
[4] Calci KR, 1998, APPL ENVIRON MICROB, V64, P5027
[5] Calderaro A, 1998, J BASIC MICROB, V38, P323, DOI 10.1002/(SICI)1521-4028(199811)38:5/6<323::AID-JOBM323>3.0.CO
[6] 2-6
[7] CHAO A, 1984, SCAND J STAT, V11, P783
[8] CORNAX R, 1994, ZBL BAKT-INT J MED M, V281, P214
[9] Davis BM, 2002, MOBILE DNA-UK, P1040
[10] Drasar B. S., 1985, INTESTINAL MICROBIOL

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