Identification of strain specific markers in Bacillus anthracis by random amplification of polymorphic DNA

被引:25
作者
Levy, H
Fisher, M
Ariel, N
Altboum, Z
Kobiler, D
机构
[1] Israel Inst Biol Res, Dept Infect Dis, IL-70450 Ness Ziona, Israel
[2] Israel Inst Biol Res, Dept Biochem & Mol Genet, IL-70450 Ness Ziona, Israel
关键词
Bacillus anthracis; classification; RAPD; DNA; typing;
D O I
10.1016/j.femsle.2005.01.039
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Classification and differentiation of Bacillus anthracis isolates by genetic markers play an important role in anthrax research. We used a PCR based method - Random Amplification of Polymorphic DNA (RAPD) - to identify genetic markers in B. anthracis strains. Twenty-five differential genetic markers were identified which divided the strains into five different groups. Three selected RAPD-markers were cloned and sequenced. The five RAPD-derived genotypes could be defined by integration of these three markers. This system offers a simple non-expensive method to classify B. anthracis strains in laboratories involved in the research of this bacterium. (C) 2005 Federation of European Microbiological Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:199 / 205
页数:7
相关论文
共 24 条
[1]   THE BCET GENE OF BACILLUS-CEREUS ENCODES AN ENTEROTOXIC PROTEIN [J].
AGATA, N ;
OHTA, M ;
ARAKAWA, Y ;
MORI, M .
MICROBIOLOGY-UK, 1995, 141 :983-988
[2]   Identification of a region of genetic variability among Bacillus anthracis strains and related species [J].
Andersen, GL ;
Simchock, JM ;
Wilson, KH .
JOURNAL OF BACTERIOLOGY, 1996, 178 (02) :377-384
[3]   Genome-based bioinformatic selection of chromosomal Bacillus anthracis putative vaccine candidates coupled with proteomic identification of surface-associated antigens [J].
Ariel, N ;
Zvi, A ;
Makarova, KS ;
Chitlaru, T ;
Elhanany, E ;
Velan, B ;
Cohen, S ;
Friedlander, AM ;
Shafferman, A .
INFECTION AND IMMUNITY, 2003, 71 (08) :4563-4579
[4]  
Daffonchio D, 1999, APPL ENVIRON MICROB, V65, P1298
[5]   BACILLUS-CEREUS AND RELATED SPECIES [J].
DROBNIEWSKI, FA .
CLINICAL MICROBIOLOGY REVIEWS, 1993, 6 (04) :324-338
[6]   Diversity among French Bacillus anthracis isolates [J].
Fouet, AS ;
Smith, KL ;
Keys, C ;
Vaissaire, J ;
Le Doujet, C ;
Lévy, M ;
Mock, M ;
Keim, P .
JOURNAL OF CLINICAL MICROBIOLOGY, 2002, 40 (12) :4732-4734
[7]  
Ghelardi E, 2002, FEMS MICROBIOL LETT, V208, P129, DOI 10.1016/S0378-1097(02)00450-0
[8]   Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis -: One species on the basis of genetic evidence [J].
Helgason, E ;
Okstad, OA ;
Caugant, DA ;
Johansen, HA ;
Fouet, A ;
Mock, M ;
Hegna, I ;
Kolsto, AB .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (06) :2627-2630
[9]   Molecular subtyping of Bacillus anthracis and the 2001 bioterrorism-associated anthrax outbreak, United States [J].
Hoffmaster, AR ;
Fitzgerald, CC ;
Ribot, E ;
Mayer, LW ;
Popovic, T .
EMERGING INFECTIOUS DISEASES, 2002, 8 (10) :1111-1116
[10]   Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis [J].
Ivanova, N ;
Sorokin, A ;
Anderson, I ;
Galleron, N ;
Candelon, B ;
Kapatral, V ;
Bhattacharyya, A ;
Reznik, G ;
Mikhailova, N ;
Lapidus, A ;
Chu, L ;
Mazur, M ;
Goltsman, E ;
Larsen, N ;
D'Souza, M ;
Walunas, T ;
Grechkin, Y ;
Pusch, G ;
Haselkorn, R ;
Fonstein, M ;
Ehrlich, SD ;
Overbeek, R ;
Kyrpides, N .
NATURE, 2003, 423 (6935) :87-91