NMR solution structure of domain 1 of human annexin I shows an autonomous folding unit

被引:12
作者
Gao, JH [1 ]
Li, Y [1 ]
Yan, HG [1 ]
机构
[1] Michigan State Univ, Dept Biochem, E Lansing, MI 48824 USA
关键词
D O I
10.1074/jbc.274.5.2971
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Annexins are excellent models for studying the folding mechanisms of multidomain proteins because they have four-eight homologous helical domains with low identity in sequence but high similarity in folding. The structure of an isolated domain 1 of human annexin I has been determined by NMR spectroscopy, The sequential assignments of the H-1, C-13, and N-15 resonances of the isolated domain 1 were established by multinuclear, multidimensional NMR spectroscopy. The solution structure of the isolated domain 1 was derived from 1,099 experimental NMR restraints using a hybrid distance geometry-simulated annealing protocol. The root mean square deviation of the ensemble of 20 refined conformers that represent the structure from the mean coordinate set derived from them was 0.57 +/- 0.14 Angstrom and 1.11 +/- 0.19 ? for the backbone atoms and all heavy atoms, respectively. The NMR structure of the isolated domain 1 could be superimposed with a root mean square deviation of 1.36 Angstrom for all backbone atoms with the corresponding part of the crystal structure of a truncated human annexin I containing all four domains, indicating that the structure of the isolated domain 1 is highly similar to that when it folded together with the other three domains. The result suggests that in contrast to isolated domain 2, which is largely unfolded in solution, isolated domain 1 constitutes an autonomous folding unit and interdomain interactions may play critical roles in the folding of annexin I.
引用
收藏
页码:2971 / 2977
页数:7
相关论文
共 48 条
[1]   AMINO-ACID-SEQUENCE ANALYSIS OF THE ANNEXIN SUPERGENE FAMILY OF PROTEINS [J].
BARTON, GJ ;
NEWMAN, RH ;
FREEMONT, PS ;
CRUMPTON, MJ .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1991, 198 (03) :749-760
[2]  
BASUS VJ, 1989, METHOD ENZYMOL, V177, P132
[3]   MLEV-17-BASED TWO-DIMENSIONAL HOMONUCLEAR MAGNETIZATION TRANSFER SPECTROSCOPY [J].
BAX, A ;
DAVIS, DG .
JOURNAL OF MAGNETIC RESONANCE, 1985, 65 (02) :355-360
[4]   H-1-H-1 CORRELATION VIA ISOTROPIC MIXING OF C-13 MAGNETIZATION, A NEW 3-DIMENSIONAL APPROACH FOR ASSIGNING H-1 AND C-13 SPECTRA OF C-13-ENRICHED PROTEINS [J].
BAX, A ;
CLORE, GM ;
GRONENBORN, AM .
JOURNAL OF MAGNETIC RESONANCE, 1990, 88 (02) :425-431
[5]   NATURAL ABUNDANCE N-15 NMR BY ENHANCED HETERONUCLEAR SPECTROSCOPY [J].
BODENHAUSEN, G ;
RUBEN, DJ .
CHEMICAL PHYSICS LETTERS, 1980, 69 (01) :185-189
[6]   COHERENCE TRANSFER BY ISOTROPIC MIXING - APPLICATION TO PROTON CORRELATION SPECTROSCOPY [J].
BRAUNSCHWEILER, L ;
ERNST, RR .
JOURNAL OF MAGNETIC RESONANCE, 1983, 53 (03) :521-528
[7]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[8]  
BRUNGER AT, 1992, XPLOR VERSION 3 1 SY
[9]   Exploring the folding pathways of annexin I, a multidomain protein. II. Hierarchy in domain folding propensities may govern the folding process [J].
Cordier-Ochsenbein, F ;
Guerois, R ;
Russo-Marie, F ;
Neumann, JM ;
Sanson, A .
JOURNAL OF MOLECULAR BIOLOGY, 1998, 279 (05) :1177-1185
[10]   Exploring the folding pathways of annexin I, a multidomain protein. I. Non-native structures stabilize the partially folded state of the isolated domain 2 of annexin I [J].
Cordier-Ochsenbein, F ;
Guerois, R ;
Baleux, F ;
Huynh-Dinh, T ;
Lirsac, PN ;
Russo-Marie, F ;
Neumann, JM ;
Sanson, A .
JOURNAL OF MOLECULAR BIOLOGY, 1998, 279 (05) :1163-1175