Another step forward for SELEXive splicing

被引:14
作者
Buratti, E [1 ]
Baralle, FE [1 ]
机构
[1] Int Ctr Genet Engn & Biotechnol, I-34012 Trieste, Italy
关键词
D O I
10.1016/j.molmed.2004.11.007
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Splicing alterations are being increasingly reported to cause human diseases. However, predicting beforehand whether a given mutation might lead to aberrant splicing is often hampered by insufficient knowledge of which cis-acting sequences affect exon recognition. To better define these sequences, experimental methods have been developed that integrate pre-mRNA splicing with sequence selection assays. Recently, a novel in vivo selection method based on a partially randomized full-length exon has enabled the identification of new splicing-controlling elements in SMN exon 7. Skipping of this exon results in an aberrant protein and is involved in proximal spinal muscular atrophy (SMA). Hopefully, this approach will provide novel targets for nascent RNA molecular medicine approaches for the recovery of abnormal pre-mRNA splicing events.
引用
收藏
页码:5 / 9
页数:5
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共 31 条
  • [1] The neuronal RNA binding protein Nova-1 recognizes specific RNA targets in vitro and in vivo
    Buckanovich, RJ
    Darnell, RB
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 1997, 17 (06) : 3194 - 3201
  • [2] RNA folding affects the recruitment of SR proteins by mouse and human polypurinic enhancer elements in the fibronectin EDA dxon
    Buratti, E
    Muro, AF
    Giombi, M
    Gherbassi, D
    Iaconcig, A
    Baralle, FE
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 2004, 24 (03) : 1387 - 1400
  • [3] RNA-BINDING SPECIFICITY OF HNRNP A1 - SIGNIFICANCE OF HNRNP A1 HIGH-AFFINITY BINDING-SITES IN PRE-MESSENGER-RNA SPLICING
    BURD, CG
    DREYFUSS, G
    [J]. EMBO JOURNAL, 1994, 13 (05) : 1197 - 1204
  • [4] Listening to silence and understanding nonsense: Exonic mutations that affect splicing
    Cartegni, L
    Chew, SL
    Krainer, AR
    [J]. NATURE REVIEWS GENETICS, 2002, 3 (04) : 285 - 298
  • [5] Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1
    Cartegni, L
    Krainer, AR
    [J]. NATURE GENETICS, 2002, 30 (04) : 377 - 384
  • [6] ESEfinder: a web resource to identify exonic splicing enhancers
    Cartegni, L
    Wang, JH
    Zhu, ZW
    Zhang, MQ
    Krainer, AR
    [J]. NUCLEIC ACIDS RESEARCH, 2003, 31 (13) : 3568 - 3571
  • [7] The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers
    Cavaloc, Y
    Bourgeois, CF
    Kister, L
    Stévenin, J
    [J]. RNA, 1999, 5 (03) : 468 - 483
  • [8] Identification of a new class of exonic splicing enhancers by in vivo selection
    Coulter, LR
    Landree, MA
    Cooper, TA
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 1997, 17 (04) : 2143 - 2150
  • [9] Coupling of transcription with alternative splicing:: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer
    Cramer, P
    Cáceres, JF
    Cazalla, D
    Kadener, S
    Muro, AF
    Baralle, FE
    Kornblihtt, AR
    [J]. MOLECULAR CELL, 1999, 4 (02) : 251 - 258
  • [10] Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities
    Dember, LM
    Kim, ND
    Liu, KQ
    Anderson, P
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (05) : 2783 - 2788