Idiomarina loihiensis sp nov., a halophilic γ-Proteobacterium from the L(o)over-bar-'ihi submarine volcano, Hawai'i

被引:64
作者
Donachie, SP
Hou, SB
Gregory, TS
Malahoff, A
Alam, M
机构
[1] Univ Hawaii, Dept Microbiol, Honolulu, HI 96822 USA
[2] Inst Geol & Nucl Sci, Lower Hutt, New Zealand
[3] Univ Hawaii, SOEST, Dept Ocean & Resources Engn, Honolulu, HI 96822 USA
关键词
D O I
10.1099/ijs.0.02701-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
During an investigation of bacterial diversity at hydrothermal vents on the Lo'ihi Seamount, Hawai'i, a novel bacterium (designated L2-TRT) was cultivated, which shares 99-9% 16S rRNA gene sequence similarity over 1415 nt with an uncultured eubacterium from sediment at a depth of 11 000 m in the Mariana Trench. The nearest cultivated neighbour of L2-TRT, however, is Idiomarina abyssalis KMM 227(T), with which it shares 98.9% 16S rRNA sequence similarity. L2-TRT differed from I. abyssalis KMM 227(T) in several phenotypic respects, including growth at 46degreesC and in medium that contained 20% (w/v) NaCl. DNA-DNA hybridization data showed that L2-TRT did not belong to the species I. abyssalis (43.4% DNA-DNA reassociation). Cells of L2-TRT were Gram-negative rods, 0.35 mum wide and 0.7-1.0 mum long, which were occasionally up to 1.8 mum in length. Cells were motile by a single polar or subpolar flagellum. The major fatty acid in L2-TRT was iso-C-15:0 (32-6%). The DNA G+C content was 47.4 mol%. Phenotypic and genotypic analyses indicated that L2-TRT could be assigned to the genus Idiomarina but, based on significant phenotypic and genotypic differences, constituted a novel species within this genus, Idiomarina loihiensis sp. nov., of which L2-TRT (=ATCC BAA-735(T) =DSM 15497(T)) is the type strain.
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页码:1873 / 1879
页数:7
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