Transcript map of the 8p23 putative tumor suppressor region

被引:69
作者
Sun, PC
Uppaluri, R
Schmidt, AP
Pashia, ME
Quant, EC
Sunwoo, JB
Gollin, SM
Scholnick, SB
机构
[1] Washington Univ, Sch Med, Dept Otolaryngol Head & Neck Surg, St Louis, MO 63110 USA
[2] Univ Pittsburgh, Grad Sch Publ Hlth, Dept Human Genet, Pittsburgh, PA 15261 USA
关键词
squamous cell carcinoma; physical chromosome mapping; tumor suppressor genes; gene order; amino acid sequence homology; nucleic acid sequence homology; amino acid repetitive sequences; amino acid consensus sequence; amino acid motifs; conserved sequence;
D O I
10.1006/geno.2001.6587
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Cancers of the head and neck, prostate, liver, and bladder exhibit minimal regions of deletion within chromosomal band 8p23 that either overlap or map very close to one another. We previously refined a minimal region of deletion in squamous cell carcinomas to a 112-kb interval within 8p23. There seems to be only a single gene within this region that is expressed in normal upper aerodigestive tract epithelium. This candidate for the squamous cancer suppressor, CUB and sushi multiple domains-1 (CSMD1), extends into the minimal regions of deletions defined for the other types of cancer with 8p23 deletions. RT-PCR and EST data indicate that CSMD1 is also expressed in those organs, making this gene a candidate for a suppressor of multiple types of cancer. Both the sequence of the gene and the organization of the protein are highly conserved in the mouse.
引用
收藏
页码:17 / 25
页数:9
相关论文
共 45 条
  • [1] SOLUTION STRUCTURE OF THE 5TH REPEAT OF FACTOR-H - A 2ND EXAMPLE OF THE COMPLEMENT CONTROL PROTEIN MODULE
    BARLOW, PN
    NORMAN, DG
    STEINKASSERER, A
    HORNE, TJ
    PEARCE, J
    DRISCOLL, PC
    SIM, RB
    CAMPBELL, ID
    [J]. BIOCHEMISTRY, 1992, 31 (14) : 3626 - 3634
  • [2] SECONDARY STRUCTURE OF A COMPLEMENT CONTROL PROTEIN MODULE BY 2-DIMENSIONAL H-1-NMR
    BARLOW, PN
    BARON, M
    NORMAN, DG
    DAY, AJ
    WILLIS, AC
    SIM, RB
    CAMPBELL, ID
    [J]. BIOCHEMISTRY, 1991, 30 (04) : 997 - 1004
  • [3] Bateman A, 2004, NUCLEIC ACIDS RES, V32, pD138, DOI [10.1093/nar/gkp985, 10.1093/nar/gkh121, 10.1093/nar/gkr1065]
  • [4] The C4b-binding protein protein S interaction is hydrophobic in nature
    Blom, AM
    Covell, DG
    Wallqvist, A
    Dahlbäck, B
    Villoutreix, BO
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 1998, 1388 (01): : 181 - 189
  • [5] Sequence and structure-based prediction of eukaryotic protein phosphorylation sites
    Blom, N
    Gammeltoft, S
    Brunak, S
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1999, 294 (05) : 1351 - 1362
  • [6] Association of 8p23 deletions with poor survival in head and neck cancer
    Bockmühl, U
    Ishwad, CS
    Ferrell, RE
    Gollin, SM
    [J]. OTOLARYNGOLOGY-HEAD AND NECK SURGERY, 2001, 124 (04) : 451 - 455
  • [7] THE CUB DOMAIN - A WIDESPREAD MODULE IN DEVELOPMENTALLY-REGULATED PROTEINS
    BORK, P
    BECKMANN, G
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1993, 231 (02) : 539 - 545
  • [8] EXON AMPLIFICATION - A STRATEGY TO ISOLATE MAMMALIAN GENES BASED ON RNA SPLICING
    BUCKLER, AJ
    CHANG, DD
    GRAW, SL
    BROOK, JD
    HABER, DA
    SHARP, PA
    HOUSMAN, DE
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (09) : 4005 - 4009
  • [9] Prediction of complete gene structures in human genomic DNA
    Burge, C
    Karlin, S
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1997, 268 (01) : 78 - 94
  • [10] CAIRNS P, 1994, CANCER RES, V54, P1422