A new perspective on the coarse-grained dynamics of fluids

被引:34
作者
Ayton, GS [1 ]
Tepper, HL
Mirijanian, DT
Voth, GA
机构
[1] Univ Utah, Dept Chem, Salt Lake City, UT 84112 USA
[2] Univ Utah, Henry Eyring Ctr Theoret Chem, Salt Lake City, UT 84112 USA
关键词
D O I
10.1063/1.1644092
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A computational methodology is presented that is designed to model, at a coarse-grained level, the mesoscale dynamics of fluids and potentially other forms of soft matter. Within a molecular dynamics simulation, "ghost" particles of a specific size, corresponding to the fundamental length-scale of coarse-graining, are used as micro-probes designed to respond to local mesoscale fluid flows and stress gradients. A subsequent coarse-grained model is then developed that incorporates both the coarse-grained mesoscale dynamics and isothermal compressibility of the original microscopic system. The method is applied to water and methanol. A contrast with dissipative particle dynamics (DPD) is also presented. (C) 2004 American Institute of Physics.
引用
收藏
页码:4074 / 4088
页数:15
相关论文
共 44 条
  • [1] Coarse-grained dynamics of one chain in a polymer melt
    Akkermans, RLC
    Briels, WJ
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2000, 113 (15) : 6409 - 6422
  • [2] Allen M. P., 2017, Computer Simulation of Liquids, VSecond, DOI [10.1093/oso/9780198803195.001.0001, DOI 10.1093/OSO/9780198803195.001.0001]
  • [3] Bridging microscopic and mesoscopic simulations of lipid bilayers
    Ayton, G
    Voth, GA
    [J]. BIOPHYSICAL JOURNAL, 2002, 83 (06) : 3357 - 3370
  • [4] Ayton G, 1999, MOL PHYS, V96, P915, DOI 10.1080/00268979909483031
  • [5] Interfacing continuum and molecular dynamics: An application to lipid bilayers
    Ayton, G
    Bardenhagen, SG
    McMurtry, P
    Sulsky, D
    Voth, GA
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2001, 114 (15) : 6913 - 6924
  • [6] Depletion effects in binary hard-sphere fluids
    Biben, T
    Bladon, P
    Frenkel, D
    [J]. JOURNAL OF PHYSICS-CONDENSED MATTER, 1996, 8 (50) : 10799 - 10821
  • [7] A lattice-gas model of microemulsions
    Boghosian, BM
    Coveney, PV
    Emerton, AN
    [J]. PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES, 1996, 452 (1948): : 1221 - 1250
  • [8] Measurement of the hydrodynamic corrections to the Brownian motion of two colloidal spheres
    Crocker, JC
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1997, 106 (07) : 2837 - 2840
  • [9] Entropic forces in binary hard sphere mixtures: Theory and simulation
    Dickman, R
    Attard, P
    Simonian, V
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1997, 107 (01) : 205 - 213
  • [10] Investigation of apparent correlated motion of Brownian particles
    Durand, RV
    Franck, C
    [J]. PHYSICAL REVIEW E, 1997, 56 (02): : 1998 - 2011