O-GLYCBASE version 4.0: a revised database of O-glycosylated proteins

被引：130

作者：

Gupta, R ^{[1
]}

Birch, H ^{[1
]}

Rapacki, K ^{[1
]}

Brunak, S ^{[1
]}

Hansen, JE ^{[1
]}

机构：

[1] Tech Univ Denmark, Ctr Biol Sequence Anal, DK-2800 Lyngby, Denmark

来源：

NUCLEIC ACIDS RESEARCH | 1999年 / 27卷 / 01期

关键词：

D O I：

10.1093/nar/27.1.370

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

O-GLYCBASE is a database of glycoproteins with O-linked glycosylation sites. Entries with at least one experimentally verified O-glycosylation site have been complied from protein sequence databases and literature. Each entry contains information about the glycan involved, the species, sequence, a literature reference and http-linked cross-references to other databases. Version 4.0 contains 179 protein entries, an approximate 15% increase over the last version. Sequence logos representing the acceptor specificity patterns for GalNAc, GlcNAc, mannosyl and xylosyl transferases are shown. The O-GLYCBASE database is available through the WWW at http://www.cbs.dtu.dk/databases/OGLYCBASE/.

引用

页码：370 / 372

页数：3

共 27 条

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