Structural Inhomogeneity of Water by Complex Network Analysis

被引:36
作者
Rao, Francesco [1 ,2 ]
Garrett-Roe, Sean [3 ]
Hamm, Peter [3 ]
机构
[1] Univ Freiburg, Freiburg Inst Adv Studies FRIAS, Freiburg, Germany
[2] Univ Strasbourg, Lab Chim Biophys ISIS, Strasbourg, France
[3] Univ Zurich, Inst Phys Chem, CH-8057 Zurich, Switzerland
基金
瑞士国家科学基金会;
关键词
FREE-ENERGY SURFACES; LIQUID WATER; DYNAMICS; SPECTROSCOPY; LANDSCAPES; ENTROPY; PEPTIDE; HOD; IR;
D O I
10.1021/jp1060792
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
There is still an open debate regarding the structure forming capabilities of water at ambient conditions. To probe the presence of such inhomogeneities, we apply complex network analysis methods to a molecular dynamics simulation at room temperature. This study provides both a structural and quantitative characterization of kinetically homogeneous substates present in bulk water. We find that the conformation-space network is highly modular, and that structural properties of water molecules are spatially correlated over at least two solvation shells. From a kinetic point of view, the free energy surface is characterized by multiple heterogeneous metastable regions with different populations and marginal barriers separating them. The typical time scale of hopping between them is 200-400 fs. A scanning in temperature reveals that those substates can be stabilized either entropically or enthalpically. The latter resembles an icelike domain that extends for at least two solvation shells.
引用
收藏
页码:15598 / 15604
页数:7
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