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Effect of replication on the third base of codons

被引：13
作者：
Cebrat, S
Dudek, MR
Gierlik, A
Kowalczuk, M
Mackiewicz, P
机构：
[1] Univ Wroclaw, Inst Microbiol, PL-54148 Wroclaw, Poland
[2] Univ Wroclaw, Inst Theoret Phys, PL-50204 Wroclaw, Poland
来源：
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS | 1999年 / 265卷 / 1-2期
关键词：
DNA walk; long-range correlations; replication;
D O I：
10.1016/S0378-4371(98)00657-8
中图分类号：
O4 [物理学];
学科分类号：
0702 ;
摘要：
We have analyzed third position in codons and have observed strong long-range correlations along DNA sequence. We have shown that the correlations are caused mostly by asymmetric replication. In the analysis, we have used a DNA walk (spider analysis Cebrat et al., Microbial Comparative Genomics 2(4) (1997) 259-268) in two-dimensional space [A-T,G-C]. The particular case of the E. coli sequence has been studied in detail. (C) 1999 Elsevier Science B.V. All rights reserved.
引用
收藏
页码：78 / 84
页数：7
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