DPB1*8601, a previously unrecognized DPB1 variant in the Caucasoid population

被引:3
作者
Bengtsson, M [1 ]
机构
[1] Univ Uppsala Hosp, Rudbeck Lab, Clin Immunol Sect, Dept Oncol Radiol & Clin Immunol, SE-75185 Uppsala, Sweden
来源
TISSUE ANTIGENS | 2001年 / 57卷 / 06期
关键词
HLA; DPB1*8601; allele; sequence-based typing;
D O I
10.1034/j.1399-0039.2001.057006536.x
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
A new, previously unrecognized DPB1* allele, DPB1*8601, was found in a Swedish family. The new allele was carried on the common North European haplotype HLA A1-B8-DR3. Both individuals carrying the new allele were initially typed as clear DPB1*4601,*6601 but after family studies and further typing with allele-specific primers it was concluded that a new allele was present together with the common DPB1*0401. The new allele was investigated by direct sequencing of exon 2 in both forward and reverse directions employing intron primers combined with either an allele-specific sense or anti-sense biotinylated primer for bi-directional sequencing. The new allele is identical to DPB1*1701 in the five first variable regions. In the sixth region, however, DPB1*8601 carries the GGPM motif shared by several common alleles such as DPB1*0201 and 0401 and 0402.
引用
收藏
页码:536 / 539
页数:4
相关论文
共 17 条
[1]   Complete sequence and gene map of a human major histocompatibility complex [J].
Beck, S ;
Geraghty, D ;
Inoko, H ;
Rowen, L ;
Aguado, B ;
Bahram, S ;
Campbell, RD ;
Forbes, SA ;
Guillaudeux, T ;
Hood, L ;
Horton, R ;
Janer, M ;
Jasoni, C ;
Madan, A ;
Milne, S ;
Neville, M ;
Oka, A ;
Qin, S ;
Ribas-Despuig, G ;
Rogers, J ;
Shiina, T ;
Spies, T ;
Tamiya, G ;
Tashiro, H ;
Trowsdale, J ;
Vu, Q ;
Williams, L ;
Yamazaki, M .
NATURE, 1999, 401 (6756) :921-923
[2]  
BEGOVICH AB, 1992, J IMMUNOL, V148, P249
[3]   Nomenclature for factors of the HLA system, 1998 [J].
Bodmer, JG ;
Marsh, SGE ;
Albert, ED ;
Bodmer, WF ;
Bontrop, RE ;
Dupont, B ;
Erlich, HA ;
Hansen, JA ;
Mach, B ;
Mayr, WR ;
Parham, P ;
Petersdorf, EW ;
Sasazuki, T ;
Schreuder, GMT ;
Strominger, JL ;
Svejgaard, A ;
Terasaki, PI .
TISSUE ANTIGENS, 1999, 53 (04) :407-446
[4]   Comprehensive HLA-DP typing using polymerase chain reaction with sequence-specific primers and 95 sequence-specific primer mixes [J].
Gilchrist, FC ;
Bunce, M ;
Lympany, PA ;
Welsh, KI ;
du Bois, RM .
TISSUE ANTIGENS, 1998, 51 (01) :51-61
[5]   CONSERVATIVE EVOLUTION OF THE MHC-DP REGION IN ANTHROPOID PRIMATES [J].
GRAHOVAC, B ;
SCHONBACH, C ;
BRANDLE, U ;
MAYER, WE ;
GOLUBIC, M ;
FIGUEROA, F ;
TROWSDALE, J ;
KLEIN, J .
HUMAN IMMUNOLOGY, 1993, 37 (02) :75-84
[6]   Rapid allelic diversification and intensified selection at antigen recognition sites of the Mhc class II DPB1 locus during hominoid evolution [J].
Gyllensten, U ;
Bergstrom, T ;
Josefsson, A ;
Sundvall, M ;
Erlich, HA .
TISSUE ANTIGENS, 1996, 47 (03) :212-221
[7]   HLA-DP - Part of the concert [J].
Meyer, CG ;
May, J ;
Schnittger, L .
IMMUNOLOGY TODAY, 1997, 18 (02) :58-61
[8]   Six new DPB1 alleles identified in a study of 1,302 unrelated bone marrow donor-recipient pairs [J].
Noreen, H ;
Steiner, L ;
Davidson, M ;
Johnson, S ;
Segall, M ;
Begovich, AB .
TISSUE ANTIGENS, 1997, 49 (05) :512-516
[9]   A 1.1-Mb transcript map of the hereditary hemochromatosis locus [J].
Ruddy, DA ;
Kronmal, GS ;
Lee, VK ;
Mintier, GA ;
Quintana, L ;
Domingo, R ;
Meyer, NC ;
Irrinki, A ;
McClelland, EE ;
Fullan, A ;
Mapa, FA ;
Moore, T ;
Thomas, W ;
Loeb, DB ;
Harmon, C ;
Tsuchihashi, Z ;
Wolff, RK ;
Schatzman, RC ;
Feder, JN .
GENOME RESEARCH, 1997, 7 (05) :441-456
[10]  
Salamon H, 1999, GENETICS, V152, P393