A universal classification of eukaryotic transposable elements implemented in Repbase

被引:335
作者
Kapitonov, Vladimir V. [1 ]
Jurka, Jerzy [1 ]
机构
[1] Genet Informat Res Inst, Mountain View, CA 94043 USA
关键词
D O I
10.1038/nrg2165-c1
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
引用
收藏
页码:411 / 412
页数:2
相关论文
共 21 条
[1]   The genome of the diatom Thalassiosira pseudonana:: Ecology, evolution, and metabolism [J].
Armbrust, EV ;
Berges, JA ;
Bowler, C ;
Green, BR ;
Martinez, D ;
Putnam, NH ;
Zhou, SG ;
Allen, AE ;
Apt, KE ;
Bechner, M ;
Brzezinski, MA ;
Chaal, BK ;
Chiovitti, A ;
Davis, AK ;
Demarest, MS ;
Detter, JC ;
Glavina, T ;
Goodstein, D ;
Hadi, MZ ;
Hellsten, U ;
Hildebrand, M ;
Jenkins, BD ;
Jurka, J ;
Kapitonov, VV ;
Kröger, N ;
Lau, WWY ;
Lane, TW ;
Larimer, FW ;
Lippmeier, JC ;
Lucas, S ;
Medina, M ;
Montsant, A ;
Obornik, M ;
Parker, MS ;
Palenik, B ;
Pazour, GJ ;
Richardson, PM ;
Rynearson, TA ;
Saito, MA ;
Schwartz, DC ;
Thamatrakoln, K ;
Valentin, K ;
Vardi, A ;
Wilkerson, FP ;
Rokhsar, DS .
SCIENCE, 2004, 306 (5693) :79-86
[2]   Sequencing of Aspergillus nidulans and comparative analysis with A-fumigatus and A-oryzae [J].
Galagan, JE ;
Calvo, SE ;
Cuomo, C ;
Ma, LJ ;
Wortman, JR ;
Batzoglou, S ;
Lee, SI ;
Bastürkmen, M ;
Spevak, CC ;
Clutterbuck, J ;
Kapitonov, V ;
Jurka, J ;
Scazzocchio, C ;
Farman, M ;
Butler, J ;
Purcell, S ;
Harris, S ;
Braus, GH ;
Draht, O ;
Busch, S ;
D'Enfert, C ;
Bouchier, C ;
Goldman, GH ;
Bell-Pedersen, D ;
Griffiths-Jones, S ;
Doonan, JH ;
Yu, J ;
Vienken, K ;
Pain, A ;
Freitag, M ;
Selker, EU ;
Archer, DB ;
Peñalva, MA ;
Oakley, BR ;
Momany, M ;
Tanaka, T ;
Kumagai, T ;
Asai, K ;
Machida, M ;
Nierman, WC ;
Denning, DW ;
Caddick, M ;
Hynes, M ;
Paoletti, M ;
Fischer, R ;
Miller, B ;
Dyer, P ;
Sachs, MS ;
Osmani, SA ;
Birren, BW .
NATURE, 2005, 438 (7071) :1105-1115
[3]   Repbase update, a database of eukaryotic repetitive elements [J].
Jurka, J ;
Kapitonov, VV ;
Pavlicek, A ;
Klonowski, P ;
Kohany, O ;
Walichiewicz, J .
CYTOGENETIC AND GENOME RESEARCH, 2005, 110 (1-4) :462-467
[4]   PROTOTYPIC SEQUENCES FOR HUMAN REPETITIVE DNA [J].
JURKA, J ;
WALICHIEWICZ, J ;
MILOSAVLJEVIC, A .
JOURNAL OF MOLECULAR EVOLUTION, 1992, 35 (04) :286-291
[5]   PiFs meet Tourists and Harbingers:: A superfamily reunion [J].
Jurka, J ;
Kapitonov, VV .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (22) :12315-12316
[6]   Repbase Update - a database and an electronic journal of repetitive elements [J].
Jurka, J .
TRENDS IN GENETICS, 2000, 16 (09) :418-420
[7]   Repetitive sequences in complex genomes: Structure and evolution [J].
Jurka, Jerzy ;
Kapitonov, Vladimir V. ;
Kohany, Oleksiy ;
Jurka, Michael V. .
ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, 2007, 8 :241-259
[8]  
Kapitonov V., 2004, Encyclopedia of Molecular Cell Biology and Molecular Medicine, VVolume 1, P251
[9]   Helitrons on a roll:: eukaryotic rolling-circle transposons [J].
Kapitonov, Vladimir V. ;
Jurka, Jerzy .
TRENDS IN GENETICS, 2007, 23 (10) :521-529
[10]   Self-synthesizing DNA transposons in eukaryotes [J].
Kapitonov, VV ;
Jurka, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (12) :4540-4545