Lipidomics at the interface of Structure and Function in Systems Biology

被引:149
作者
Gross, Richard W. [1 ,2 ,3 ,4 ]
Han, Xianlin [1 ,2 ]
机构
[1] Washington Univ, Sch Med, Div Bioorgan Chem & Mol Pharmacol, St Louis, MO 63110 USA
[2] Washington Univ, Sch Med, Dept Med, St Louis, MO 63110 USA
[3] Washington Univ, Sch Med, Dept Dev Biol, St Louis, MO 63110 USA
[4] Washington Univ, Dept Chem, St Louis, MO 63105 USA
来源
CHEMISTRY & BIOLOGY | 2011年 / 18卷 / 03期
基金
美国国家卫生研究院;
关键词
MASS-SPECTROMETRIC ANALYSIS; ELECTROSPRAY-IONIZATION; SHOTGUN LIPIDOMICS; EXTRACTS; IDENTIFICATION; PLASMALOGEN; CARDIOLIPIN; CANCER; GLYCEROPHOSPHOLIPIDS; ETHANOLAMINE;
D O I
10.1016/j.chembiol.2011.01.014
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cells, tissues, and biological fluids contain a diverse repertoire of many tens of thousands of structurally distinct lipids that play multiple roles in cellular signaling, bioenergetics, and membrane structure and function. In an era where lipid-related disease states predominate, lipidomics has assumed a prominent role in systems biology through its unique ability to directly identify functional alterations in multiple lipid metabolic and signaling networks. The development of shotgun lipidomics has led to the facile accrual of high density information on alterations in the lipidome mediating physiologic cellular adaptation during health and pathologic alterations during disease. Through both targeted and nontargeted investigations, lipidomics has already revealed the chemical mechanisms underlying many lipid-related disease states.
引用
收藏
页码:284 / 291
页数:8
相关论文
共 57 条
[1]  
BARTZ RLIW, 2007, ANAL CHEM, V48, P6790
[2]   Stable Isotope Labeled 4-(Dimethylamino)benzoic Acid Derivatives of Glycerophosphoethanolamine Lipids [J].
Berry, Karin A. Zemski ;
Turner, William W. ;
VanNieuwenhze, Michael S. ;
Murphy, Robert C. .
ANALYTICAL CHEMISTRY, 2009, 81 (16) :6633-6640
[3]   On the mechanism of mitochondrial uncoupling protein 1 function [J].
Breen, EP ;
Gouin, SG ;
Murphy, AF ;
Haines, LR ;
Jackson, AM ;
Pearson, TW ;
Murphy, PV ;
Richard, KP .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (04) :2114-2119
[4]   Structure of the amantadine binding site of influenza M2 proton channels in lipid bilayers [J].
Cady, Sarah D. ;
Schmidt-Rohr, Klaus ;
Wang, Jun ;
Soto, Cinque S. ;
DeGrado, William F. ;
Hong, Mei .
NATURE, 2010, 463 (7281) :689-U127
[5]   An enzyme that regulates ether lipid signaling pathways in cancer annotated by multidimensional profiling [J].
Chiang, Kyle P. ;
Niessen, Sherry ;
Saghatelian, Alan ;
Cravatt, Benjamin F. .
CHEMISTRY & BIOLOGY, 2006, 13 (10) :1041-1050
[6]   Centerband-only detection of exchange: Efficient analysis of dynamics in solids by NMR [J].
deAzevedo, ER ;
Hu, WG ;
Bonagamba, TJ ;
Schmidt-Rohr, K .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (36) :8411-8412
[7]   A Mouse Macrophage Lipidome [J].
Dennis, Edward A. ;
Deems, Raymond A. ;
Harkewicz, Richard ;
Quehenberger, Oswald ;
Brown, H. Alex ;
Milne, Stephen B. ;
Myers, David S. ;
Glass, Christopher K. ;
Hardiman, Gary ;
Reichart, Donna ;
Merrill, Alfred H., Jr. ;
Sullards, M. Cameron ;
Wang, Elaine ;
Murphy, Robert C. ;
Raetz, Christian R. H. ;
Garrett, Teresa A. ;
Guan, Ziqiang ;
Ryan, Andrea C. ;
Russell, David W. ;
McDonald, Jeffrey G. ;
Thompson, Bonne M. ;
Shaw, Walter A. ;
Sud, Manish ;
Zhao, Yihua ;
Gupta, Shakti ;
Maurya, Mano R. ;
Fahy, Eoin ;
Subramaniam, Shankar .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2010, 285 (51) :39976-39985
[8]   The effect of obesity on health outcomes [J].
Dixon, John B. .
MOLECULAR AND CELLULAR ENDOCRINOLOGY, 2010, 316 (02) :104-108
[9]   Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry [J].
Ejsing, Christer S. ;
Sampaio, Julio L. ;
Surendranath, Vineeth ;
Duchoslav, Eva ;
Ekroos, Kim ;
Klemm, Robin W. ;
Simons, Kai ;
Shevchenko, Andrej .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (07) :2136-2141
[10]   ELECTROSPRAY IONIZATION FOR MASS-SPECTROMETRY OF LARGE BIOMOLECULES [J].
FENN, JB ;
MANN, M ;
MENG, CK ;
WONG, SF ;
WHITEHOUSE, CM .
SCIENCE, 1989, 246 (4926) :64-71