Phylogenetic and morphotaxonomic revision of Ramichloridium and allied genera

被引:246
作者
Arzanlou, M.
Groenewald, J. Z.
Gams, W.
Braun, U.
Shin, H.-D
Crous, P. W.
机构
[1] CBS Fungal Biodivers Ctr, NL-3584 CT Utrecht, Netherlands
[2] Univ Wageningen & Res Ctr, Phytopathol Lab, NL-6709 PD Wageningen, Netherlands
[3] Univ Halle Wittenberg, Inst Biol Geobot & Bot Garten, D-06099 Halle, Germany
[4] Korea Univ, Div Environm Sci & Ecol Engn, Seoul 136701, South Korea
关键词
capnodiales; Chaetothyriales; Mycosphaerella; Periconiella; phylogeny; Rhinocladiella; Veronaea; RIBOSOMAL DNA; PHEOHYPHOMYCOSIS; IDENTIFICATION; MACKENZIEI; FONSECAEA; ANAMORPHS; VERONAEA; TAXONOMY;
D O I
10.3114/sim.2007.58.03
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The phylogeny of the genera Periconiella, Ramichloridium, Rhinocladiella and Veronaea was explored by means of partial sequences of the 28S (LSU) rRNA gene and the ITS region (ITS1, 5.8S rDNA and ITS2). Based on the LSU sequence data, ramichloridium-like species segregate into eight distinct clusters. These include the Capnodiales (Mycosphaerellaceae and Teratosphaeriaceae), the Chaetothyriales (Herpotrichiellaceae), the Pleosporales, and five ascomycete clades with uncertain affinities. The type species of Ramichloridium, R. apiculatum, together with R. musae, R. biverticillatum, R. cerophilum, R. verrucosum, R. pini, and three new species isolated from Strelitzia, Musa and forest soil, respectively, reside in the Capnodiales clade. The human-pathogenic species R. mackenziei and R. basitonum, together with R. fasciculatum and R. anceps, cluster with Rhinocladiella (type species: Rh. atrovirens, Herpotrichiellaceae, Chaetothyriales), and are allocated to this genus. Veronaea botryosa, the type species of the genus Veronaea, also resides in the Chaetothyriales clade, whereas Veronaea simplex clusters as a sister taxon to the Venturiaceae (Pleosporales), and is placed in a new genus, Veronaeopsis. Ramichloridium obovoideum clusters with Carpoligna pleurothecii (anamorph: Pleurothecium sp., Chaetosphaeriales), and a new combination is proposed in Pleurothecium. Other ramichloridium-like clades include R. subulatum and R. epichloes (incertae sedis, Sordariomycetes), for which a new genus, Radulidium is erected. Ramichloridium schulzeri and its varieties are placed in a new genus, Myrmecridium (incertae sedis, Sordariomycetes). The genus Pseudovirgaria (incertae sedis) is introduced to accommodate ramichloridium-like isolates occurring on various species of rust fungi. A veronaea-like isolate from Bertia moriformis with phylogenetic affinity to the Annulatascaceae (Sordariomycetidae) is placed in a new genus, Rhodoveronaea. Besides Ramichloridium, Periconiella is also polyphyletic. Thysanorea is introduced to accommodate Peticoniella papuana (Herpotrichiellaceae), which is unrelated to the type species, P velutina (Mycosphaerellaceae).
引用
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页码:57 / 93
页数:37
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