Using concepts in literature-based discovery: Simulating Swanson's Raynaud-fish oil and migraine-magnesium discoveries

被引:142
作者
Weeber, M
Klein, H
de Jong-van den Berg, LTW
Vos, R
机构
[1] Univ Groningen, Inst Drug Explorat, NL-9713 AV Groningen, Netherlands
[2] Univ Maastricht, Fac Hlth Sci, NL-6200 MD Maastricht, Netherlands
[3] Ctr Language & Cognit Groningen, Dept Humanities Comp, NL-9700 AS Groningen, Netherlands
来源
JOURNAL OF THE AMERICAN SOCIETY FOR INFORMATION SCIENCE AND TECHNOLOGY | 2001年 / 52卷 / 07期
关键词
D O I
10.1002/asi.1104
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Literature-based discovery has resulted in new knowledge. In the biomedical context, Don R. Swanson has generated several literature-based hypotheses that have been corroborated experimentally and clinically. In this paper, we propose a two-step model of the discovery process in which hypotheses are generated and subsequently tested. We have implemented this model in a Natural Language Processing system that uses biomedical Unified Medical Language System (UMLS) concepts as its unit of analysis. We use the semantic information that is provided with these concepts as a powerful filter to successfully simulate Swanson's discoveries of connecting Raynaud's disease with fish oil and migraine with a magnesium deficiency.
引用
收藏
页码:548 / 557
页数:10
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