Escherichia coli cystathionine γ-synthase does not obey ping-pong kinetics.: Novel continuous assays for the elimination and substitution reactions

被引:31
作者
Aitken, SM [1 ]
Kim, DH [1 ]
Kirsch, JF [1 ]
机构
[1] Univ Calif Berkeley, Mol & Cell Biol Dept, Berkeley, CA 94720 USA
关键词
D O I
10.1021/bi035107o
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cystathionine gamma-synthase (CGS) is a pyridoxal phosphate-dependent enzyme that catalyzes a gamma-replacement reaction, in which the succinyl group of an O-succinyl-L-homoserine (L-OSHS) is displaced by the thiol Of L-Cysteine to form L-cystathionine, in the first step of the bacterial transsulfuration pathway. The mechanism of Escherichia coli CGS (eCGS) is ordered with L-OSHS associating before L-CYS (k(catR)/K-mR(L-OSHS) = 9.8 x 10(4) M-1 s(-1), where the subscript R denotes the replacement reaction). The mechanism becomes ping-pong (k(catR)/K-mR(L-OSHS) = 4.9 x 10(4) M-1 s(-1)) at L-CYS concentrations lower than K-m(L-Cys). The enzyme also catalyzes a competing gamma-elimination reaction, in which L-OSHS is hydrolyzed to succinate, NH3, and alpha-ketobutyrate (k(catE)/K-mE(L-OSHS) = 1350 +/- 90 M-1 s(-1), where the subscript E denotes the elimination reaction). The k(cat)/K-m(L-OSHS) Versus pH profile of eCGS is bell-shaped for both reactions. The pH optimum and the pK(a) values for the acidic and basic limbs are 7.4, 6.8 +/- 0.1, and 8.0 +/- 0.1, respectively, for the elimination reaction and 7.8, 7.4 +/- 0.1, and 8.3 +/- 0.1, respectively, for the replacement reaction. The internal aldimine of eCGS remains protonated at pH < 10.5, and the alpha-amino group Of L-OSHS has a pKa of 9.71 +/- 0.01; therefore, neither limb of the k(cat)/K-m(L-OSHS) versus pH profiles can be assigned to aldimine, or to L-OSHS prototropy. Novel continuous assays for the elimination reaction, employing D-2-hydroxyisocaproate dehydrogenase, and for the substitution reaction, employing cystathionine beta-lyase and L-lactate dehydrogenase as coupling enzymes, are described.
引用
收藏
页码:11297 / 11306
页数:10
相关论文
共 34 条
[1]   Kinetics of the yeast cystathionine β-synthase forward and reverse reactions:: Continuous assays and the equilibrium constant for the reaction [J].
Aitken, SM ;
Kirsch, JF .
BIOCHEMISTRY, 2003, 42 (02) :571-578
[2]   NAD+-DEPENDENT D-2-HYDROXYISOCAPROATE DEHYDROGENASE OF LACTOBACILLUS-DELBRUECKII SUBSP BULGARICUS - GENE CLONING AND ENZYME CHARACTERIZATION [J].
BERNARD, N ;
JOHNSEN, K ;
FERAIN, T ;
GARMYN, D ;
HOLS, P ;
HOLBROOK, JJ ;
DELCOUR, J .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1994, 224 (02) :439-446
[3]   REACTION-MECHANISM OF ESCHERICHIA-COLI CYSTATHIONINE GAMMA-SYNTHASE - DIRECT EVIDENCE FOR A PYRIDOXAMINE DERIVATIVE OF VINYLGLYOXYLATE AS A KEY INTERMEDIATE IN PYRIDOXAL-PHOSPHATE DEPENDENT GAMMA-ELIMINATION AND GAMMA-REPLACEMENT REACTIONS [J].
BRZOVIC, P ;
HOLBROOK, EL ;
GREENE, RC ;
DUNN, MF .
BIOCHEMISTRY, 1990, 29 (02) :442-451
[4]   Crystal structure of Escherichia coli cystathionine γ-synthase at 1.5 Å resolution [J].
Clausen, T ;
Huber, R ;
Prade, L ;
Wahl, MC ;
Messerschmidt, A .
EMBO JOURNAL, 1998, 17 (23) :6827-6838
[5]  
DATKO AH, 1974, J BIOL CHEM, V249, P1139
[6]  
DUCHANGE N, 1983, J BIOL CHEM, V258, P4868
[7]   COUPLED ENZYME ASSAYS - GENERAL EXPRESSION FOR TRANSIENT [J].
EASTERBY, JS .
BIOCHIMICA ET BIOPHYSICA ACTA, 1973, 293 (02) :552-558
[8]   SPECTROSCOPIC DETERMINATION OF TRYPTOPHAN AND TYROSINE IN PROTEINS [J].
EDELHOCH, H .
BIOCHEMISTRY, 1967, 6 (07) :1948-&
[9]   TISSUE SULFHYDRYL GROUPS [J].
ELLMAN, GL .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1959, 82 (01) :70-77
[10]   THE TYROSINE-225 TO PHENYLALANINE MUTATION OF ESCHERICHIA-COLI ASPARTATE-AMINOTRANSFERASE RESULTS IN AN ALKALINE TRANSITION IN THE SPECTROPHOTOMETRIC AND KINETIC PKA VALUES AND REDUCED VALUES OF BOTH KCAT AND KM [J].
GOLDBERG, JM ;
SWANSON, RV ;
GOODMAN, HS ;
KIRSCH, JF .
BIOCHEMISTRY, 1991, 30 (01) :305-312