Protein families and RNA recognition

被引:126
作者
Chen, Y
Varani, G [1 ]
机构
[1] Univ Washington, Dept Chem, Seattle, WA 98195 USA
[2] Univ Washington, Dept Biochem, Seattle, WA 98195 USA
关键词
D O I
10.1111/j.1742-4658.2005.04650.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
This minireview series examines the structural principles underlying the biological function of RNA-binding proteins. The structural work of the last decade has elucidated the structures of essentially all the major RNA-binding protein families; it has also demonstrated how RNA recognition takes place. The ribosome structures have further integrated this knowledge into principles for the assembly of complex ribonucleoproteins. Structural and biochemical work has revealed unexpectedly that several RNA-binding proteins bind to other proteins in addition to RNA or instead of RNA. This tremendous increase in the structural knowledge has expanded not only our understanding of the RNA recognition principle, but has also provided new insight into the biological function of these proteins and has helped to design better experiments to understand their biological roles.
引用
收藏
页码:2088 / 2097
页数:10
相关论文
共 87 条
  • [1] Specificity of ribonucleoprotein interaction determined by RNA folding during complex formation
    Allain, FHT
    Gubser, CC
    Howe, PWA
    Nagai, K
    Neuhaus, D
    Varani, G
    [J]. NATURE, 1996, 380 (6575) : 646 - 650
  • [2] Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin
    Allain, FHT
    Bouvet, P
    Dieckmann, T
    Feigon, J
    [J]. EMBO JOURNAL, 2000, 19 (24) : 6870 - 6881
  • [3] Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA
    Antson, AA
    Dodson, EJ
    Dodson, G
    Greaves, RB
    Chen, XP
    Gollnick, P
    [J]. NATURE, 1999, 401 (6750) : 235 - 242
  • [4] THE STRUCTURE OF TRP RNA-BINDING ATTENUATION PROTEIN
    ANTSON, AA
    OTRIDGE, J
    BRZOZOWSKI, AM
    DODSON, EJ
    DODSON, GG
    WILSON, KS
    SMITH, TM
    YANG, M
    KURECKI, T
    GOLLNICK, P
    [J]. NATURE, 1995, 374 (6524) : 693 - 700
  • [5] Structural mimicry of retroviral Tat proteins by constrained, β-hairpin peptidomimetics:: Ligands with high affinity and selectivity for viral TAR RNA regulatory elements
    Athanassiou, Z
    Dias, RLA
    Moehle, K
    Dobson, N
    Varani, G
    Robinson, JA
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (22) : 6906 - 6913
  • [6] alpha helix-RNA major groove recognition in an HIV-1 Rev peptide RRE RNA complex
    Battiste, JL
    Mao, HY
    Rao, NS
    Tan, RY
    Muhandiram, DR
    Kay, LE
    Frankel, AD
    Williamson, JR
    [J]. SCIENCE, 1996, 273 (5281) : 1547 - 1551
  • [7] Binding of the protein kinase PKR to RNAs with secondary structure defects: Role of the tandem A-G mismatch and noncontiguous helixes
    Bevilacqua, PC
    George, CX
    Samuel, CE
    Cech, TR
    [J]. BIOCHEMISTRY, 1998, 37 (18) : 6303 - 6316
  • [8] Minor-groove recognition of double-stranded RNA by the double-stranded RNA-binding domain from the RNA-activated protein kinase PKR
    Bevilacqua, PC
    Cech, TR
    [J]. BIOCHEMISTRY, 1996, 35 (31) : 9983 - 9994
  • [9] Crystallographic and modeling studies of RNase III suggest a mechanism for double-stranded RNA cleavage
    Blaszczyk, J
    Tropea, JE
    Bubunenko, M
    Routzahn, KM
    Waugh, DS
    Court, DL
    Ji, XH
    [J]. STRUCTURE, 2001, 9 (12) : 1225 - 1236
  • [10] NMR SOLUTION STRUCTURE OF A DSRNA BINDING DOMAIN FROM DROSOPHILA STAUFEN PROTEIN REVEALS HOMOLOGY TO THE N-TERMINAL DOMAIN OF RIBOSOMAL-PROTEIN S5
    BYCROFT, M
    GRUNERT, S
    MURZIN, AG
    PROCTOR, M
    STJOHNSTON, D
    [J]. EMBO JOURNAL, 1995, 14 (14) : 3563 - 3571