Chryseobacterium solincola sp nov., isolated from soil

被引:28
作者
Benmalek, Yam [3 ]
Cayol, Jean-Luc [1 ,2 ]
Bouanane, Nabila A. [3 ]
Hacene, Hocine [3 ]
Fauque, Guy [1 ,2 ]
Fardeau, Marie-Laure [1 ,2 ]
机构
[1] Univ Aix Marseille 1, Microbiol Lab, IRD, ESIL,UMR D180, F-13288 Marseille 09, France
[2] Univ Mediterranee, Microbiol Lab, IRD, ESIL,UMR D180, F-13288 Marseille 09, France
[3] Univ Sci & Technol Houari Boumediene, Dept BCM, Fac Biol Sci, Microbiol Lab, Bab Ezzouar, Alger, Algeria
关键词
GEN; NOV; EMENDED DESCRIPTION; FLAVOBACTERIACEAE; CLASSIFICATION; FAMILY;
D O I
10.1099/ijs.0.008631-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-staining-negative, yellow-pigmented, strictly aerobic bacterium, designated strain 1YB-R12(T), was isolated from a soil sample in western Algeria. The novel isolate was heterotrophic, chemoorganotrophic, halotolerant and psychrotolerant. The temperature and pH optima for growth were 28-30 degrees C and pH 7.3-8. The bacterium tolerated up to 6% (w/v) NaCl. Cells were non-motile, non-gliding and non-spore-forming, and were characterized by a variable morphological cycle. Flexirubin-type pigments were not detected. 16S rRNA gene sequence analysis showed that strain 1YB-R12(T) occupied a distinct lineage within the genus Chryseobacterium and shared highest sequence similarity with Chryseobacterium haifense LMG 24029(T) (96.5%). The DNA G+C content of strain 1YB-R12(T) was 40.9 mol%. The predominant cellular fatty acids were anteiso-C-15:0 (41.4%) and iso-C-15:0 (14.4%). On the basis of phenotypic properties and phylogenetic distinctiveness, strain 1YB-R12(T) is considered to represent a novel species of the genus Chryseobacterium, for which the name Chryseobacterium solincola sp. nov. is proposed. The type strain is 1YB-R12(T) (=DSM 22468(T)=CCUG 55604(T)).
引用
收藏
页码:1876 / 1880
页数:5
相关论文
共 30 条
[1]  
Bernardet Bernardet J.-F. J.-F., Prokaryotes, V7 7, P455, DOI [DOI 10.1007/0-387-30747-8-16, 10.1007/0-387-30747-8-16, DOI 10.1007/0-387-30747-8_16]
[2]  
Bernardet J.-F., 2006, The prokaryotes, P638, DOI [DOI 10.1007/0-387-30747-8_25, 10.1007/0-387-30747-825, DOI 10.1007/0-387-30747-825]
[3]   Cutting a gordian knot: Emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom nov (basonym, Cytophaga aquatilis Strohl and Tait 1978) [J].
Bernardet, JF ;
Segers, P ;
Vancanneyt, M ;
Berthe, F ;
Kersters, K ;
Vandamme, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (01) :128-148
[4]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
[5]   Chryseobacterium arothri sp nov., isolated from the kidneys of a pufferfish [J].
Campbell, Sonia ;
Harada, Renee M. ;
Li, Qing X. .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :290-293
[6]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
[7]  
Felsenstein J, 1993, PHYLIP: Phylogeny inference package
[8]   Chryseobacterium hispanicum sp nov., isolated from the drinking water distribution system of Sevilla, Spain [J].
Gallego, Virginia ;
Garcia, Maria Teresa ;
Ventosa, Antonio .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2006, 56 :1589-1592
[9]  
Hall T. A., NUCL ACIDS S SER, V41, P95
[10]   Chryseobacterium bovis sp nov., isolated from raw cow's milk [J].
Hantsis-Zacharov, Elionora ;
Senderovich, Yigal ;
Halpern, Malka .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :1024-1028