Hydrophobic tendency of polar group hydration as a major force in type I antifreeze protein recognition

被引:60
作者
Yang, C [1 ]
Sharp, KA [1 ]
机构
[1] Univ Penn, Dept Biochem & Biophys, ER Johnson Res Fdn, Philadelphia, PA 19104 USA
关键词
solvation; random network model; thermal hysteresis protein; water structure; polarity;
D O I
10.1002/prot.20429
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The random network model of water quantitatively describes the different hydration heat capacities of polar and apolar solutes in terms of distortions of the water-water hydrogen bonding angle in the first hydration shell (Gallagher and Sharp, JACS 2003;125:9853). The distribution of this angle in pure water is bimodal, with a low-angle population and high-angle population. Polar solutes increase the high-angle population while apolar solutes increase the low-angle population. The ratio of the two populations quantifies the hydrophobicity of the solute and provides a sensitive measure of water structural distortions. This method of analysis is applied to study hydration of type I thermal hysteresis protein (THP) from winter flounder and three quadruple mutants of four threonine residues at positions 2, 13, 24, and 35. Wild-type and two mutants (VVVV and AAAA) have antifreeze (thermal hysteresis) activity, while the other mutant (SSSS) has no activity. The analysis reveals significant differences in the hydration structure of the ice-binding site. For the SSSS mutant, polar groups have a typical polar-like hydration, that is, more high-angle H-bonds than bulk water. For the wildtype and active mutants, polar groups have unusual, very apolar-like hydration, that is, more low-angle H-bonds than bulk water. This pattern of hydration was seen previously in the structurally distinct type III THPs (Yang & Sharp Biophys Chem 2004;109:137), suggesting for the first time a general mechanism for different THP classes. The specific shape, residue size, and clustering of both polar and apoler groups are essential for an active ice binding surface. (c) 2005 Wiley-Liss, Inc.
引用
收藏
页码:266 / 274
页数:9
相关论文
共 29 条
[1]   New ice-binding face for type I antifreeze protein [J].
Baardsnes, J ;
Kondejewski, LH ;
Hodges, RS ;
Chao, H ;
Kay, C ;
Davies, PL .
FEBS LETTERS, 1999, 463 (1-2) :87-91
[2]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[3]   STRUCTURE-FUNCTION RELATIONSHIP IN THE GLOBULAR TYPE-III ANTIFREEZE PROTEIN - IDENTIFICATION OF A CLUSTER OF SURFACE RESIDUES REQUIRED FOR BINDING TO ICE [J].
CHAO, H ;
SONNICHSEN, FD ;
DELUCA, CI ;
SYKES, BD ;
DAVIES, PL .
PROTEIN SCIENCE, 1994, 3 (10) :1760-1769
[4]   Ice-binding surface of fish type III antifreeze [J].
Chen, GJ ;
Jia, ZC .
BIOPHYSICAL JOURNAL, 1999, 77 (03) :1602-1608
[5]   Ice-binding mechanism of winter flounder antifreeze proteins [J].
Cheng, AL ;
Merz, KM .
BIOPHYSICAL JOURNAL, 1997, 73 (06) :2851-2873
[6]   The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice [J].
DeLuca, CI ;
Davies, PL ;
Ye, QL ;
Jia, ZC .
JOURNAL OF MOLECULAR BIOLOGY, 1998, 275 (03) :515-525
[7]   Analysis of thermal hysteresis protein hydration using the random network model [J].
Gallagher, KR ;
Sharp, KA .
BIOPHYSICAL CHEMISTRY, 2003, 105 (2-3) :195-209
[8]   A new angle on heat capacity changes in hydrophobic solvation [J].
Gallagher, KR ;
Sharp, KA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (32) :9853-9860
[9]  
GALLAGHER KR, 2002, ELECTROSTATIC CONTRI
[10]   Quantitative and qualitative analysis of type III antifreeze protein structure and function [J].
Graether, SP ;
DeLuca, CI ;
Baardsnes, J ;
Hill, GA ;
Davies, PL ;
Jia, ZC .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (17) :11842-11847