Representing metabolic pathway information: an object-oriented approach

被引：12

作者：

Ellis, LBM

Speedie, SM

McLeish, R

机构：

[1] Univ Minnesota, Sch Med, Ctr Biodegradat Res & Informat, Minneapolis, MN 55455 USA

[2] Univ Minnesota, Sch Med, Dept Lab Med & Pathol, Minneapolis, MN 55455 USA

来源：

BIOINFORMATICS | 1998年 / 14卷 / 09期

关键词：

D O I：

10.1093/bioinformatics/14.9.803

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Motivation: The University of Minnesota Biocatalysis/ Biodegradation Database (UM-BBD) is a website providing information and dynamic links for microbial metabolic pathways, enzyme reactions, and their substrates and products. The Compound, Organism, Reaction and Enzyme (CORE) object-oriented database management system was developed to contain and serve this information. Results: CORE was developed using Java, an object-oriented programming language, and PSE persistent object classes from Object Design, Inc. CORE dynamically generates descriptive web pages for reactions, compounds and enzymes, and reconstructs ad hoc pathway maps starting from any UM-BBD reaction.

引用

页码：803 / 806

页数：4

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