Cloning and characterization of three novel genes, ALS2CR1, ALS2CR2, and ALS2CR3, in the juvenile amyotrophic lateral sclerosis (ALS2) critical region at chromosome 2q33-q34:: Candidate genes for ALS2

被引:41
作者
Hadano, S
Yanagisawa, Y
Skaug, J
Fichter, K
Nasir, J
Martindale, D
Koop, BF
Scherer, SW
Nicholson, DW
Rouleau, GA
Ikeda, JE
Hayden, MR [1 ]
机构
[1] Univ British Columbia, Dept Med Genet, Vancouver, BC V5Z 4H4, Canada
[2] Univ British Columbia, Ctr Mol Med & Therapeut, Vancouver, BC V5Z 4H4, Canada
[3] Tokai Univ, Sch Med, Japan Sci & Technol Corp, Int Cooperat Res Project,, Isehara, Kanagawa 2591193, Japan
[4] Tokai Univ, Inst Med Sci, Mol Med Res Ctr, Dept Mol Neurosci, Isehara, Kanagawa 2591193, Japan
[5] Hosp Sick Children, Dept Genet, Toronto, ON M5G 1X8, Canada
[6] Univ Victoria, Dept Biol, Ctr Environm Hlth, Victoria, BC V8W 3N5, Canada
[7] Merck Frosst Ctr Therapeut Res, Dept Biochem & Mol Biol, Pointe Claire, PQ H9R 4P8, Canada
[8] McGill Univ, Neurosci Res Ctr, Montreal, PQ H3G 1A4, Canada
[9] Montreal Gen Hosp, Res Inst, Montreal, PQ H3G 1A4, Canada
基金
日本科学技术振兴机构;
关键词
D O I
10.1006/geno.2000.6392
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Amyotrophic lateral sclerosis is a progressive neurodegenerative disease that manifests as selective upper and lower motor neuron degeneration. The autosomal recessive form of juvenile amyotrophic lateral sclerosis (ALS2) has previously been mapped to the 1.7-cM interval flanked by D2S116 and D2S2237 on human chromosome 2q33-q34. We identified three novel full-length transcripts encoded by three distinct genes (HGMW-approved symbols ALS2CR1, ALS2CR2, and ALS2CR3) within the ALS2 critical region. The intron-exon organizations of these genes as well as those of CFLAR, CASP10, and CASP8, which were previously mapped to this region, mere defined. These genes were evaluated for mutations in ALS2 patients, and no disease-associated sequence alterations in either exons or intron-exon boundaries were observed. Sequence analysis of overlapping RT-PCR products covering the whole coding sequence for each transcript revealed no aberrant mRNA sequences. These data strongly indicate that ALS2CR1, ALS2CK2, ALS2CR3, CFLAR, CASP10, and CASP8 are not causative genes for ALS2. (C) 2001 Academic Press.
引用
收藏
页码:200 / 213
页数:14
相关论文
共 45 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]   Fast transport and retrograde movement of huntingtin and HAP 1 in axons [J].
BlockGalarza, J ;
Chase, KO ;
Sapp, E ;
Vaughn, KT ;
Vallee, RB ;
DiFiglia, M ;
Aronin, N .
NEUROREPORT, 1997, 8 (9-10) :2247-2251
[3]   Involvement of MACH, a novel MORT1/FADD-interacting protease, in Fas/APO-1- and TNF receptor-induced cell death [J].
Boldin, MP ;
Goncharov, TM ;
Goltsev, YV ;
Wallach, D .
CELL, 1996, 85 (06) :803-815
[4]   MOLECULAR LINKAGE OF THE HUMAN CTLA4 AND CD28 IG-SUPERFAMILY GENES IN YEAST ARTIFICIAL CHROMOSOMES [J].
BUONAVISTA, N ;
BALZANO, C ;
PONTAROTTI, P ;
LEPASLIER, D ;
GOLSTEIN, P .
GENOMICS, 1992, 13 (03) :856-861
[5]   Linkage of the gene for an autosomal dominant form of juvenile amyotrophic lateral sclerosis to chromosome 9q34 [J].
Chance, PF ;
Rabin, BA ;
Ryan, SG ;
Ding, Y ;
Scavina, M ;
Crain, B ;
Griffin, JW ;
Cornblath, DR .
AMERICAN JOURNAL OF HUMAN GENETICS, 1998, 62 (03) :633-640
[6]   ABI-2, A NOVEL SH3-CONTAINING PROTEIN INTERACTS WITH THE C-ABL TYROSINE KINASE AND MODULATES C-ABL TRANSFORMING ACTIVITY [J].
DAI, ZH ;
PENDERGAST, AM .
GENES & DEVELOPMENT, 1995, 9 (21) :2569-2582
[7]   HUMAN IG SUPERFAMILY CTLA-4 GENE - CHROMOSOMAL LOCALIZATION AND IDENTITY OF PROTEIN-SEQUENCE BETWEEN MURINE AND HUMAN CTLA-4 CYTOPLASMIC DOMAINS [J].
DARIAVACH, P ;
MATTEI, MG ;
GOLSTEIN, P ;
LEFRANC, MP .
EUROPEAN JOURNAL OF IMMUNOLOGY, 1988, 18 (12) :1901-1905
[8]   A physical map of 30,000 human genes [J].
Deloukas, P ;
Schuler, GD ;
Gyapay, G ;
Beasley, EM ;
Soderlund, C ;
Rodriguez-Tomé, P ;
Hui, L ;
Matise, TC ;
McKusick, KB ;
Beckmann, JS ;
Bentolila, S ;
Bihoreau, MT ;
Birren, BB ;
Browne, J ;
Butler, A ;
Castle, AB ;
Chiannilkulchai, N ;
Clee, C ;
Day, PJR ;
Dehejia, A ;
Dibling, T ;
Drouot, N ;
Duprat, S ;
Fizames, C ;
Fox, S ;
Gelling, S ;
Green, L ;
Harrison, P ;
Hocking, R ;
Holloway, E ;
Hunt, S ;
Keil, S ;
Lijnzaad, P ;
Louis-Dit-Sully, C ;
Ma, J ;
Mendis, A ;
Miller, J ;
Morissette, J ;
Muselet, D ;
Nusbaum, HC ;
Peck, A ;
Rozen, S ;
Simon, D ;
Slonim, DK ;
Staples, R ;
Stein, LD ;
Stewart, EA ;
Suchard, MA ;
Thangarajah, T ;
Vega-Czarny, N .
SCIENCE, 1998, 282 (5389) :744-746
[9]   SUMO-1 modification of IκBα inhibits NF-κB activation [J].
Desterro, JMP ;
Rodriguez, MS ;
Hay, RT .
MOLECULAR CELL, 1998, 2 (02) :233-239
[10]   Analysis of expressed sequence tags indicates 35,000 human genes [J].
Ewing, B ;
Green, P .
NATURE GENETICS, 2000, 25 (02) :232-234